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Gene : ATCHR12 A. thaliana

DB identifier  ? AT3G06010 Secondary Identifier  ? locus:2083033
Brief Description  SNF2/Brahma-type chromatin-remodeling protein CHR12
TAIR Computational Description  SNF2/Brahma-type chromatin-remodeling protein CHR12;(source:Araport11)
TAIR Curator Summary  Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. One of three classes of SWI/SNF ATPases and the core enzyme of MINU1/2-associated SWI/SNF (MAS) complexes (PMID:36471048).AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.
TAIR Short Description  Homeotic gene regulator
TAIR Aliases  ATCHR12, CHR12, MINU1

3 Gene Rifs

1 Organism

16 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 5390  
Location: Chr3:1802141-1807530 reverse strand

Gene models - ATCHR12 AT3G06010

? Gene models

Transcripts: 1  Exons: 12  Introns: 11 

Overlapping Features

? Genome features that overlap coordinates of this Gene

13 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CHR12_ARATH function Probable chromatin-remodeling factor that is functionally redundant with CHR23 in root and shoot stem cell initiation, and root apical meristem (RAM) and shoot apical meristem (SAM) maintenance. Plays an important role in mediating the temporary plant growth arrest induced upon perception of stress (PubMed:17605754, PubMed:23062007). May promote seed maturation and repress initiation of germination (PubMed:24839909).
CHR12_ARATH similarity Belongs to the helicase family.
CHR12_ARATH tissue specificity Expressed in root endodermis, cotyledons, young buds, developing cauline leaves, rosette and cauline leaf stipules, sepals of young flower buds, stigma and seeds.

1 Proteins

Function

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets