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Gene : AT3G03970 A. thaliana

DB identifier  ? AT3G03970 Secondary Identifier  ? locus:2095963
Brief Description  ARM repeat superfamily protein
TAIR Computational Description  ARM repeat superfamily protein;(source:Araport11)
TAIR Curator Summary  At3G03970 encodes the plant KASH protein SINE2; SINE2 interacts with SUN1 and SUN2 and is localized at the nuclear envelope.
TAIR Short Description  ARM repeat superfamily protein
TAIR Aliases  SINE2

1 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2812  
Location: Chr3:1027866-1030677 reverse strand

Gene models - AT3G03970 AT3G03970

? Gene models

Transcripts: 6  Exons: 19  Introns: 13 

Overlapping Features

? Genome features that overlap coordinates of this Gene

16 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SINE2_ARATH function Plays a role in innate immunity against the oomycete pathogen A.arabidopsidis (Hpa).
SINE2_ARATH tissue specificity Expressed in epidermal cells, mesophyll cells, trichomes and root cells.

1 Proteins

Function

Gene Ontology

cellular component
nuclear envelope  ? ECO  
microtubule  ? ECO  
nuclear membrane  ? ECO  
molecular function
microtubule binding  ? ECO  
biological process
antifungal innate immune response  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets