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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G03890:CDS:13 | 52 | Chr3: 999667-999718 | Arabidopsis thaliana |
AT3G03890:CDS:11 | 65 | Chr3: 999841-999905 | Arabidopsis thaliana |
AT3G03890:CDS:10 | 51 | Chr3: 999990-1000040 | Arabidopsis thaliana |
AT3G03890:CDS:9 | 66 | Chr3: 1000178-1000243 | Arabidopsis thaliana |
AT3G03890:CDS:8 | 68 | Chr3: 1000324-1000391 | Arabidopsis thaliana |
AT3G03890:CDS:7 | 91 | Chr3: 1000464-1000554 | Arabidopsis thaliana |
AT3G03890:CDS:6 | 66 | Chr3: 1000663-1000728 | Arabidopsis thaliana |
AT3G03890:CDS:5 | 96 | Chr3: 1000807-1000902 | Arabidopsis thaliana |
AT3G03890:CDS:4 | 99 | Chr3: 1000990-1001088 | Arabidopsis thaliana |
AT3G03890:CDS:3 | 87 | Chr3: 1001242-1001328 | Arabidopsis thaliana |
AT3G03890:CDS:2 | 63 | Chr3: 1001436-1001498 | Arabidopsis thaliana |
AT3G03890:CDS:1 | 162 | Chr3: 1001835-1001996 | Arabidopsis thaliana |
AT3G03890:CDS:12 | 69 | Chr3: 999837-999905 | Arabidopsis thaliana |
AT3G03890:CDS:10.1 | 51 | Chr3: 999990-1000040 | Arabidopsis thaliana |
AT3G03890:CDS:9.1 | 66 | Chr3: 1000178-1000243 | Arabidopsis thaliana |
AT3G03890:CDS:8.1 | 68 | Chr3: 1000324-1000391 | Arabidopsis thaliana |
AT3G03890:CDS:7.1 | 91 | Chr3: 1000464-1000554 | Arabidopsis thaliana |
AT3G03890:CDS:6.1 | 66 | Chr3: 1000663-1000728 | Arabidopsis thaliana |
AT3G03890:CDS:5.1 | 96 | Chr3: 1000807-1000902 | Arabidopsis thaliana |
AT3G03890:CDS:4.1 | 99 | Chr3: 1000990-1001088 | Arabidopsis thaliana |
AT3G03890:CDS:3.1 | 87 | Chr3: 1001242-1001328 | Arabidopsis thaliana |
AT3G03890:CDS:2.1 | 63 | Chr3: 1001436-1001498 | Arabidopsis thaliana |
AT3G03890:CDS:1.1 | 162 | Chr3: 1001835-1001996 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G03880:exon:5 | 384 | Chr3: 998976-999359 | Arabidopsis thaliana |
AT3G03890:exon:15 | 369 | Chr3: 999350-999718 | Arabidopsis thaliana |
AT3G03890:exon:12 | 65 | Chr3: 999841-999905 | Arabidopsis thaliana |
AT3G03890:exon:1 | 761 | Chr3: 1001835-1002595 | Arabidopsis thaliana |
AT3G03890:exon:14 | 252 | Chr3: 999467-999718 | Arabidopsis thaliana |
AT3G03890:exon:13 | 85 | Chr3: 999821-999905 | Arabidopsis thaliana |
AT3G03890:exon:11 | 51 | Chr3: 999990-1000040 | Arabidopsis thaliana |
AT3G03890:exon:10 | 66 | Chr3: 1000178-1000243 | Arabidopsis thaliana |
AT3G03890:exon:9 | 68 | Chr3: 1000324-1000391 | Arabidopsis thaliana |
AT3G03890:exon:8 | 91 | Chr3: 1000464-1000554 | Arabidopsis thaliana |
AT3G03890:exon:7 | 66 | Chr3: 1000663-1000728 | Arabidopsis thaliana |
AT3G03890:exon:6 | 96 | Chr3: 1000807-1000902 | Arabidopsis thaliana |
AT3G03890:exon:5 | 99 | Chr3: 1000990-1001088 | Arabidopsis thaliana |
AT3G03890:exon:4 | 87 | Chr3: 1001242-1001328 | Arabidopsis thaliana |
AT3G03890:exon:3 | 63 | Chr3: 1001436-1001498 | Arabidopsis thaliana |
AT3G03890:exon:2 | 249 | Chr3: 1001835-1002083 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G03890:five_prime_UTR:1 | 599 | Chr3: 1001997-1002595 | Arabidopsis thaliana |
AT3G03890:five_prime_UTR:2 | 87 | Chr3: 1001997-1002083 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G03880 | locus:2079409 | AT3G03880 | 1636 | Chr3: 997724-999359 | A. thaliana | sterol O-acyltransferase, putative (DUF1639);(source:Araport11) | NULL | Protein of unknown function (DUF1639) |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G03880.1 | 1178 | Chr3: 997724-999359 |
AT3G03890.1 | 1882 | Chr3: 999350-1002595 |
AT3G03890.2 | 1273 | Chr3: 999467-1002083 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G03880:three_prime_UTR:1 | 330 | Chr3: 999030-999359 | Arabidopsis thaliana |
AT3G03890:three_prime_UTR:3 | 317 | Chr3: 999350-999666 | Arabidopsis thaliana |
AT3G03890:three_prime_UTR:2 | 252 | Chr3: 999467-999718 | Arabidopsis thaliana |
AT3G03890:three_prime_UTR:1 | 16 | Chr3: 999821-999836 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
chloroplast | ECO |
molecular function | |
protein homodimerization activity | ECO |
metal ion binding | ECO |
heme binding | ECO |
biological process | |
heme catabolic process | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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