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Gene : BPM4 A. thaliana

DB identifier  ? AT3G03740 Secondary Identifier  ? locus:2079384
Name  ? BTB-POZ and MATH domain 4 Brief Description  BTB-POZ and MATH domain 4
TAIR Computational Description  BTB-POZ and MATH domain 4;(source:Araport11)
TAIR Curator Summary  Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6).
TAIR Short Description  BTB-POZ and MATH domain 4
TAIR Aliases  ATBPM4, BPM4

1 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4793  
Location: Chr3:936878-941670 reverse strand

Gene models - BPM4 AT3G03740

? Gene models

Transcripts: 1  Exons: 4  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
BPM4_ARATH function May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
BPM4_ARATH pathway Protein modification; protein ubiquitination.
BPM4_ARATH similarity Belongs to the Tdpoz family.
BPM4_ARATH tissue specificity Ubiquitous.

1 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
molecular function
No terms in this category.
biological process
protein ubiquitination  ? ECO  
response to osmotic stress  ? ECO  
cellular response to salt stress  ? ECO  
cellular response to water deprivation  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets