External Links
- Aracyc
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- Plant Proteome Database
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G01980:CDS:8 | 279 | Chr3: 327747-328025 | Arabidopsis thaliana |
AT3G01980:CDS:5 | 230 | Chr3: 328099-328328 | Arabidopsis thaliana |
AT3G01980:CDS:3 | 200 | Chr3: 328419-328618 | Arabidopsis thaliana |
AT3G01980:CDS:1 | 92 | Chr3: 328742-328833 | Arabidopsis thaliana |
AT3G01980:CDS:8.1 | 279 | Chr3: 327747-328025 | Arabidopsis thaliana |
AT3G01980:CDS:4 | 520 | Chr3: 328099-328618 | Arabidopsis thaliana |
AT3G01980:CDS:1.1 | 92 | Chr3: 328742-328833 | Arabidopsis thaliana |
AT3G01980:CDS:8.2 | 279 | Chr3: 327747-328025 | Arabidopsis thaliana |
AT3G01980:CDS:5.1 | 230 | Chr3: 328099-328328 | Arabidopsis thaliana |
AT3G01980:CDS:2 | 220 | Chr3: 328419-328638 | Arabidopsis thaliana |
AT3G01980:CDS:8.3 | 279 | Chr3: 327747-328025 | Arabidopsis thaliana |
AT3G01980:CDS:5.2 | 230 | Chr3: 328099-328328 | Arabidopsis thaliana |
AT3G01980:CDS:3.1 | 200 | Chr3: 328419-328618 | Arabidopsis thaliana |
AT3G01980:CDS:1.2 | 92 | Chr3: 328742-328833 | Arabidopsis thaliana |
AT3G01980:CDS:7 | 254 | Chr3: 328075-328328 | Arabidopsis thaliana |
AT3G01980:CDS:3.2 | 200 | Chr3: 328419-328618 | Arabidopsis thaliana |
AT3G01980:CDS:1.3 | 92 | Chr3: 328742-328833 | Arabidopsis thaliana |
AT3G01980:CDS:6 | 544 | Chr3: 328075-328618 | Arabidopsis thaliana |
AT3G01980:CDS:1.4 | 92 | Chr3: 328742-328833 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G01980:exon:14 | 571 | Chr3: 327455-328025 | Arabidopsis thaliana |
AT3G01980:exon:8 | 520 | Chr3: 328099-328618 | Arabidopsis thaliana |
AT3G01980:exon:3 | 553 | Chr3: 328742-329294 | Arabidopsis thaliana |
AT3G01980:exon:13 | 495 | Chr3: 327531-328025 | Arabidopsis thaliana |
AT3G01980:exon:6 | 876 | Chr3: 328419-329294 | Arabidopsis thaliana |
AT3G01980:exon:12 | 440 | Chr3: 327586-328025 | Arabidopsis thaliana |
AT3G01980:exon:9 | 230 | Chr3: 328099-328328 | Arabidopsis thaliana |
AT3G01980:exon:5 | 107 | Chr3: 328742-328848 | Arabidopsis thaliana |
AT3G01980:exon:1 | 429 | Chr3: 328959-329387 | Arabidopsis thaliana |
AT3G01980:exon:11 | 743 | Chr3: 327586-328328 | Arabidopsis thaliana |
AT3G01980:exon:7 | 200 | Chr3: 328419-328618 | Arabidopsis thaliana |
AT3G01980:exon:2 | 646 | Chr3: 328742-329387 | Arabidopsis thaliana |
AT3G01980:exon:10 | 1012 | Chr3: 327607-328618 | Arabidopsis thaliana |
AT3G01980:exon:4 | 290 | Chr3: 328742-329031 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G01980:five_prime_UTR:3 | 461 | Chr3: 328834-329294 | Arabidopsis thaliana |
AT3G01980:five_prime_UTR:6 | 656 | Chr3: 328639-329294 | Arabidopsis thaliana |
AT3G01980:five_prime_UTR:5 | 15 | Chr3: 328834-328848 | Arabidopsis thaliana |
AT3G01980:five_prime_UTR:1 | 429 | Chr3: 328959-329387 | Arabidopsis thaliana |
AT3G01980:five_prime_UTR:2 | 554 | Chr3: 328834-329387 | Arabidopsis thaliana |
AT3G01980:five_prime_UTR:4 | 198 | Chr3: 328834-329031 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G01980.1 | 1647 | Chr3: 327455-329387 |
AT3G01980.3 | 1568 | Chr3: 327531-329294 |
AT3G01980.5 | 1601 | Chr3: 327531-329294 |
AT3G01980.4 | 1406 | Chr3: 327586-329387 |
AT3G01980.6 | 1589 | Chr3: 327586-329387 |
AT3G01980.2 | 1302 | Chr3: 327607-329031 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G01980:three_prime_UTR:5 | 292 | Chr3: 327455-327746 | Arabidopsis thaliana |
AT3G01980:three_prime_UTR:4 | 216 | Chr3: 327531-327746 | Arabidopsis thaliana |
AT3G01980:three_prime_UTR:3 | 161 | Chr3: 327586-327746 | Arabidopsis thaliana |
AT3G01980:three_prime_UTR:2 | 489 | Chr3: 327586-328074 | Arabidopsis thaliana |
AT3G01980:three_prime_UTR:1 | 468 | Chr3: 327607-328074 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...