External Links
- Aracyc
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- Plant Proteome Database
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- GeneVisible
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- TAIR
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- Agrisera Antibodies
- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G48060:CDS:23 | 145 | Chr2: 19651560-19651704 | Arabidopsis thaliana |
AT2G48060:CDS:22 | 145 | Chr2: 19651794-19651938 | Arabidopsis thaliana |
AT2G48060:CDS:21 | 151 | Chr2: 19652013-19652163 | Arabidopsis thaliana |
AT2G48060:CDS:20 | 510 | Chr2: 19652256-19652765 | Arabidopsis thaliana |
AT2G48060:CDS:19 | 159 | Chr2: 19652993-19653151 | Arabidopsis thaliana |
AT2G48060:CDS:18 | 396 | Chr2: 19653262-19653657 | Arabidopsis thaliana |
AT2G48060:CDS:17 | 2480 | Chr2: 19653742-19656221 | Arabidopsis thaliana |
AT2G48060:CDS:16 | 1548 | Chr2: 19656333-19657880 | Arabidopsis thaliana |
AT2G48060:CDS:15 | 234 | Chr2: 19658121-19658354 | Arabidopsis thaliana |
AT2G48060:CDS:14 | 174 | Chr2: 19658502-19658675 | Arabidopsis thaliana |
AT2G48060:CDS:13 | 129 | Chr2: 19658781-19658909 | Arabidopsis thaliana |
AT2G48060:CDS:11 | 178 | Chr2: 19659280-19659457 | Arabidopsis thaliana |
AT2G48060:CDS:10 | 216 | Chr2: 19659542-19659757 | Arabidopsis thaliana |
AT2G48060:CDS:9 | 85 | Chr2: 19659858-19659942 | Arabidopsis thaliana |
AT2G48060:CDS:8 | 116 | Chr2: 19660345-19660460 | Arabidopsis thaliana |
AT2G48060:CDS:7 | 187 | Chr2: 19660732-19660918 | Arabidopsis thaliana |
AT2G48060:CDS:6 | 157 | Chr2: 19661003-19661159 | Arabidopsis thaliana |
AT2G48060:CDS:5 | 158 | Chr2: 19661274-19661431 | Arabidopsis thaliana |
AT2G48060:CDS:3 | 160 | Chr2: 19661517-19661676 | Arabidopsis thaliana |
AT2G48060:CDS:2 | 81 | Chr2: 19661935-19662015 | Arabidopsis thaliana |
AT2G48060:CDS:1 | 49 | Chr2: 19662338-19662386 | Arabidopsis thaliana |
AT2G48060:CDS:23.1 | 145 | Chr2: 19651560-19651704 | Arabidopsis thaliana |
AT2G48060:CDS:22.1 | 145 | Chr2: 19651794-19651938 | Arabidopsis thaliana |
AT2G48060:CDS:21.1 | 151 | Chr2: 19652013-19652163 | Arabidopsis thaliana |
AT2G48060:CDS:20.1 | 510 | Chr2: 19652256-19652765 | Arabidopsis thaliana |
AT2G48060:CDS:19.1 | 159 | Chr2: 19652993-19653151 | Arabidopsis thaliana |
AT2G48060:CDS:18.1 | 396 | Chr2: 19653262-19653657 | Arabidopsis thaliana |
AT2G48060:CDS:17.1 | 2480 | Chr2: 19653742-19656221 | Arabidopsis thaliana |
AT2G48060:CDS:16.1 | 1548 | Chr2: 19656333-19657880 | Arabidopsis thaliana |
AT2G48060:CDS:15.1 | 234 | Chr2: 19658121-19658354 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G48060:exon:25 | 597 | Chr2: 19651108-19651704 | Arabidopsis thaliana |
AT2G48060:exon:12 | 178 | Chr2: 19659280-19659457 | Arabidopsis thaliana |
AT2G48060:exon:1 | 386 | Chr2: 19662338-19662723 | Arabidopsis thaliana |
AT2G48060:exon:2 | 280 | Chr2: 19662338-19662617 | Arabidopsis thaliana |
AT2G48060:exon:24 | 509 | Chr2: 19651196-19651704 | Arabidopsis thaliana |
AT2G48060:exon:23 | 145 | Chr2: 19651794-19651938 | Arabidopsis thaliana |
AT2G48060:exon:22 | 151 | Chr2: 19652013-19652163 | Arabidopsis thaliana |
AT2G48060:exon:21 | 510 | Chr2: 19652256-19652765 | Arabidopsis thaliana |
AT2G48060:exon:20 | 159 | Chr2: 19652993-19653151 | Arabidopsis thaliana |
AT2G48060:exon:19 | 396 | Chr2: 19653262-19653657 | Arabidopsis thaliana |
AT2G48060:exon:18 | 2480 | Chr2: 19653742-19656221 | Arabidopsis thaliana |
AT2G48060:exon:17 | 1548 | Chr2: 19656333-19657880 | Arabidopsis thaliana |
AT2G48060:exon:16 | 234 | Chr2: 19658121-19658354 | Arabidopsis thaliana |
AT2G48060:exon:15 | 174 | Chr2: 19658502-19658675 | Arabidopsis thaliana |
AT2G48060:exon:14 | 129 | Chr2: 19658781-19658909 | Arabidopsis thaliana |
AT2G48060:exon:13 | 109 | Chr2: 19659280-19659388 | Arabidopsis thaliana |
AT2G48060:exon:11 | 216 | Chr2: 19659542-19659757 | Arabidopsis thaliana |
AT2G48060:exon:10 | 85 | Chr2: 19659858-19659942 | Arabidopsis thaliana |
AT2G48060:exon:9 | 116 | Chr2: 19660345-19660460 | Arabidopsis thaliana |
AT2G48060:exon:8 | 187 | Chr2: 19660732-19660918 | Arabidopsis thaliana |
AT2G48060:exon:7 | 157 | Chr2: 19661003-19661159 | Arabidopsis thaliana |
AT2G48060:exon:6 | 158 | Chr2: 19661274-19661431 | Arabidopsis thaliana |
AT2G48060:exon:5 | 160 | Chr2: 19661517-19661676 | Arabidopsis thaliana |
AT2G48060:exon:4 | 81 | Chr2: 19661935-19662015 | Arabidopsis thaliana |
AT2G48060:exon:3 | 436 | Chr2: 19662182-19662617 | Arabidopsis thaliana |
AT2G48070:exon:1 | 334 | Chr2: 19662715-19663048 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G48060:five_prime_UTR:1 | 337 | Chr2: 19662387-19662723 | Arabidopsis thaliana |
AT2G48060:five_prime_UTR:2 | 231 | Chr2: 19662387-19662617 | Arabidopsis thaliana |
AT2G48060:five_prime_UTR:5 | 137 | Chr2: 19661540-19661676 | Arabidopsis thaliana |
AT2G48060:five_prime_UTR:4 | 81 | Chr2: 19661935-19662015 | Arabidopsis thaliana |
AT2G48060:five_prime_UTR:3 | 436 | Chr2: 19662182-19662617 | Arabidopsis thaliana |
AT2G48070:five_prime_UTR:1 | 148 | Chr2: 19662715-19662862 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G48070 | locus:2066374 | RPH1 | RESISTANCE TO PHYTOPHTHORA 1 | 1751 | Chr2: 19662715-19664465 | A. thaliana | resistance to phytophthora 1;(source:Araport11) | Encodes a chloroplast protein RPH1 (resistance to Phytophthora 1). Involved in immune response to Phytophthora brassicae. rph1 mutant plants (in Ws background) are susceptible to P. brassicae. | resistance to phytophthora 1 | RPH1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G48060.2 | 8247 | Chr2: 19651108-19662723 |
AT2G48060.1 | 7984 | Chr2: 19651196-19662617 |
AT2G48060.3 | 8140 | Chr2: 19651196-19662617 |
AT2G48070.1 | 1011 | Chr2: 19662715-19664042 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G48060:three_prime_UTR:2 | 452 | Chr2: 19651108-19651559 | Arabidopsis thaliana |
AT2G48060:three_prime_UTR:1 | 364 | Chr2: 19651196-19651559 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
PIEZO_ARATH | function | Pore-forming subunit of a mechanosensitive non-specific cation channel, that conducts both sodium and potassium ions. |
PIEZO_ARATH A0A1P8AYL8_ARATH A0A1P8AYH1_ARATH | similarity | Belongs to the PIEZO (TC 1.A.75) family. |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
membrane | ECO |
molecular function | |
mechanosensitive monoatomic ion channel activity | ECO |
biological process | |
detection of mechanical stimulus | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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