External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNA: 1, CDSs: 9, Exons: 14, Five Prime UTRs: 5, Genes: 2, mRNAs: 5, Three Prime UTRs: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G44850:CDS:1 | 12 | Chr2: 18498672-18498683 | Arabidopsis thaliana |
AT2G44850:CDS:2 | 110 | Chr2: 18498887-18498996 | Arabidopsis thaliana |
AT2G44850:CDS:3 | 120 | Chr2: 18499085-18499204 | Arabidopsis thaliana |
AT2G44850:CDS:4 | 57 | Chr2: 18499359-18499415 | Arabidopsis thaliana |
AT2G44850:CDS:6 | 904 | Chr2: 18499920-18500823 | Arabidopsis thaliana |
AT2G44850:CDS:5 | 105 | Chr2: 18499770-18499874 | Arabidopsis thaliana |
AT2G44850:CDS:7 | 855 | Chr2: 18499969-18500823 | Arabidopsis thaliana |
AT2G44850:CDS:5.1 | 105 | Chr2: 18499770-18499874 | Arabidopsis thaliana |
AT2G44850:CDS:7.1 | 855 | Chr2: 18499969-18500823 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G44850:exon:1 | 12 | Chr2: 18498672-18498683 | Arabidopsis thaliana |
AT2G44850:exon:2 | 110 | Chr2: 18498887-18498996 | Arabidopsis thaliana |
AT2G44850:exon:6 | 120 | Chr2: 18499085-18499204 | Arabidopsis thaliana |
AT2G44850:exon:7 | 57 | Chr2: 18499359-18499415 | Arabidopsis thaliana |
AT2G44850:exon:10 | 904 | Chr2: 18499920-18500823 | Arabidopsis thaliana |
AT2G44850:exon:3 | 88 | Chr2: 18498909-18498996 | Arabidopsis thaliana |
AT2G44850:exon:5 | 103 | Chr2: 18499085-18499187 | Arabidopsis thaliana |
AT2G44850:exon:12 | 911 | Chr2: 18499969-18500879 | Arabidopsis thaliana |
AT2G44850:exon:4 | 135 | Chr2: 18499053-18499187 | Arabidopsis thaliana |
AT2G44850:exon:8 | 225 | Chr2: 18499359-18499583 | Arabidopsis thaliana |
AT2G44850:exon:9 | 130 | Chr2: 18499745-18499874 | Arabidopsis thaliana |
AT2G44850:exon:11 | 855 | Chr2: 18499969-18500823 | Arabidopsis thaliana |
AT2G09560:exon:1 | 206 | Chr2: 18499560-18499765 | Arabidopsis thaliana |
AT2G44860:exon:7 | 379 | Chr2: 18500803-18501181 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G44850:five_prime_UTR:1 | 88 | Chr2: 18498909-18498996 | Arabidopsis thaliana |
AT2G44850:five_prime_UTR:3 | 103 | Chr2: 18499085-18499187 | Arabidopsis thaliana |
AT2G44850:five_prime_UTR:2 | 135 | Chr2: 18499053-18499187 | Arabidopsis thaliana |
AT2G44850:five_prime_UTR:4 | 225 | Chr2: 18499359-18499583 | Arabidopsis thaliana |
AT2G44850:five_prime_UTR:5 | 25 | Chr2: 18499745-18499769 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G09560 | AT2G09560 | 206 | Chr2: 18499560-18499765 | A. thaliana | Natural antisense transcript overlaps with AT2G44850;(source:Araport11) | NULL | ||||
AT2G44860 | locus:2054982 | AT2G44860 | 1760 | Chr2: 18500803-18502562 | A. thaliana | Ribosomal protein L24e family protein;(source:Araport11) | cytosolic ribosomal protein gene, part of eL24 family | Ribosomal protein L24e family protein | eL24x, RPL24C |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G44850.1 | 1203 | Chr2: 18498672-18500823 |
AT2G44850.2 | 1457 | Chr2: 18498909-18500879 |
AT2G44850.3 | 1345 | Chr2: 18499053-18500823 |
AT2G44860.2 | 797 | Chr2: 18500803-18502512 |
AT2G44860.1 | 857 | Chr2: 18500803-18502562 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G44850:three_prime_UTR:1 | 56 | Chr2: 18500824-18500879 | Arabidopsis thaliana |
AT2G44860:three_prime_UTR:1 | 231 | Chr2: 18500803-18501033 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...