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Gene : EDE1 A. thaliana

DB identifier  ? AT2G44190 Secondary Identifier  ? locus:2051869
Name  ? ENDOSPERM DEFECTIVE 1 Brief Description  ENDOSPERM DEFECTIVE protein (DUF566)
TAIR Computational Description  ENDOSPERM DEFECTIVE protein (DUF566);(source:Araport11)
TAIR Curator Summary  Encodes a novel microtubule binding protein that preferentially associates with nuclear microtubules during mitosis and is essential during the mitotic and cytokinetic stages that generate the endosperm and embryo.
TAIR Short Description  Family of unknown function (DUF566)
TAIR Aliases  EDE1, EMB3116, QWRF5

3 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2561  
Location: Chr2:18272119-18274679

Gene models - EDE1 AT2G44190

? Gene models

Transcripts: 1  Exons: 6  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
EDE1_ARATH function Microtubule-associated protein required for seed development and for microtubule function in the endosperm. Associates with nuclear microtubules during mitosis. Binds to microtubules of the spindle and spindle-poles and to midzone microtubules out of which the phragmoplast emerges. Not associated with cortical microtubules. Required for endosperm cellularization. May be bound and sequestered by GRF5 in an inactive soluble form during the early stages of mitosis.
EDE1_ARATH similarity Belongs to the QWRF family.
EDE1_ARATH subcellular location Microtubule-associated.
EDE1_ARATH tissue specificity Highly expressed in young siliques, seedlings, flower buds and open flowers. Weak expression in roots, and not detected in older siliques and mature leaves. Expressed in the embryo sac in prefertilization ovules and in seeds following fertilization. Detected in both embryo up to the heart stage and endosperm throughout most of the syncytial phase of endosperm development. Not detected in the cellularized endosperm, when cell division has ceased.

1 Proteins

Function

Gene Ontology

cellular component
nuclear microtubule  ? ECO  
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
microtubule binding  ? ECO  
biological process
endosperm development  ? ECO  
endosperm cellularization  ? ECO  
microtubule cytoskeleton organization  ? ECO  
cell division  ? ECO  
seed development  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets