External Links
- Aracyc
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G42320:CDS:1 | 785 | Chr2: 17628102-17628886 | Arabidopsis thaliana |
AT2G42320:CDS:2 | 256 | Chr2: 17628995-17629250 | Arabidopsis thaliana |
AT2G42320:CDS:3 | 210 | Chr2: 17629347-17629556 | Arabidopsis thaliana |
AT2G42320:CDS:4 | 174 | Chr2: 17629630-17629803 | Arabidopsis thaliana |
AT2G42320:CDS:6 | 186 | Chr2: 17629894-17630079 | Arabidopsis thaliana |
AT2G42320:CDS:7 | 117 | Chr2: 17630170-17630286 | Arabidopsis thaliana |
AT2G42320:CDS:8 | 282 | Chr2: 17630376-17630657 | Arabidopsis thaliana |
AT2G42320:CDS:1.1 | 785 | Chr2: 17628102-17628886 | Arabidopsis thaliana |
AT2G42320:CDS:2.1 | 256 | Chr2: 17628995-17629250 | Arabidopsis thaliana |
AT2G42320:CDS:3.1 | 210 | Chr2: 17629347-17629556 | Arabidopsis thaliana |
AT2G42320:CDS:4.1 | 174 | Chr2: 17629630-17629803 | Arabidopsis thaliana |
AT2G42320:CDS:5 | 54 | Chr2: 17629883-17629936 | Arabidopsis thaliana |
AT2G42320:CDS:1.2 | 785 | Chr2: 17628102-17628886 | Arabidopsis thaliana |
AT2G42320:CDS:2.2 | 256 | Chr2: 17628995-17629250 | Arabidopsis thaliana |
AT2G42320:CDS:3.2 | 210 | Chr2: 17629347-17629556 | Arabidopsis thaliana |
AT2G42320:CDS:4.2 | 174 | Chr2: 17629630-17629803 | Arabidopsis thaliana |
AT2G42320:CDS:5.1 | 54 | Chr2: 17629883-17629936 | Arabidopsis thaliana |
AT2G42320:CDS:1.3 | 785 | Chr2: 17628102-17628886 | Arabidopsis thaliana |
AT2G42320:CDS:2.3 | 256 | Chr2: 17628995-17629250 | Arabidopsis thaliana |
AT2G42320:CDS:3.3 | 210 | Chr2: 17629347-17629556 | Arabidopsis thaliana |
AT2G42320:CDS:4.3 | 174 | Chr2: 17629630-17629803 | Arabidopsis thaliana |
AT2G42320:CDS:6.1 | 186 | Chr2: 17629894-17630079 | Arabidopsis thaliana |
AT2G42320:CDS:7.1 | 117 | Chr2: 17630170-17630286 | Arabidopsis thaliana |
AT2G42320:CDS:8.1 | 282 | Chr2: 17630376-17630657 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G42320:exon:1 | 293 | Chr2: 17627331-17627623 | Arabidopsis thaliana |
AT2G42320:exon:2 | 157 | Chr2: 17627467-17627623 | Arabidopsis thaliana |
AT2G42320:exon:5 | 849 | Chr2: 17628038-17628886 | Arabidopsis thaliana |
AT2G42320:exon:3 | 993 | Chr2: 17627894-17628886 | Arabidopsis thaliana |
AT2G42320:exon:9 | 54 | Chr2: 17629883-17629936 | Arabidopsis thaliana |
AT2G42320:exon:4 | 925 | Chr2: 17627962-17628886 | Arabidopsis thaliana |
AT2G42320:exon:6 | 256 | Chr2: 17628995-17629250 | Arabidopsis thaliana |
AT2G42320:exon:7 | 210 | Chr2: 17629347-17629556 | Arabidopsis thaliana |
AT2G42320:exon:8 | 174 | Chr2: 17629630-17629803 | Arabidopsis thaliana |
AT2G42320:exon:10 | 186 | Chr2: 17629894-17630079 | Arabidopsis thaliana |
AT2G42320:exon:11 | 117 | Chr2: 17630170-17630286 | Arabidopsis thaliana |
AT2G42320:exon:12 | 422 | Chr2: 17630376-17630797 | Arabidopsis thaliana |
AT2G42330:exon:6 | 397 | Chr2: 17630729-17631125 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G42320:five_prime_UTR:1 | 293 | Chr2: 17627331-17627623 | Arabidopsis thaliana |
AT2G42320:five_prime_UTR:2 | 157 | Chr2: 17627467-17627623 | Arabidopsis thaliana |
AT2G42320:five_prime_UTR:5 | 64 | Chr2: 17628038-17628101 | Arabidopsis thaliana |
AT2G42320:five_prime_UTR:3 | 208 | Chr2: 17627894-17628101 | Arabidopsis thaliana |
AT2G42320:five_prime_UTR:4 | 140 | Chr2: 17627962-17628101 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G42330 | locus:2053839 | AT2G42330 | 3642 | Chr2: 17630729-17634370 | A. thaliana | GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein;(source:Araport11) | NULL | GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G42320.2 | 2507 | Chr2: 17627331-17630797 |
AT2G42320.3 | 1700 | Chr2: 17627467-17629936 |
AT2G42320.4 | 1687 | Chr2: 17627894-17629936 |
AT2G42320.1 | 2290 | Chr2: 17627962-17630797 |
AT2G42330.1 | 2786 | Chr2: 17630729-17634299 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G42320:three_prime_UTR:1 | 140 | Chr2: 17630658-17630797 | Arabidopsis thaliana |
AT2G42330:three_prime_UTR:3 | 397 | Chr2: 17630729-17631125 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
nuclear pore | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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