External Links
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNA: 1, CDSs: 8, Exons: 10, Five Prime UTR: 1, Genes: 2, mRNAs: 2, Three Prime UTRs: 2, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G41960:CDS:8 | 2157 | Chr2: 17514244-17516400 | Arabidopsis thaliana |
AT2G41960:CDS:7 | 129 | Chr2: 17516505-17516633 | Arabidopsis thaliana |
AT2G41960:CDS:6 | 132 | Chr2: 17516734-17516865 | Arabidopsis thaliana |
AT2G41960:CDS:5 | 369 | Chr2: 17516981-17517349 | Arabidopsis thaliana |
AT2G41960:CDS:4 | 142 | Chr2: 17517500-17517641 | Arabidopsis thaliana |
AT2G41960:CDS:3 | 260 | Chr2: 17517935-17518194 | Arabidopsis thaliana |
AT2G41960:CDS:2 | 339 | Chr2: 17518266-17518604 | Arabidopsis thaliana |
AT2G41960:CDS:1 | 120 | Chr2: 17518896-17519015 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G41950:exon:2 | 338 | Chr2: 17513830-17514167 | Arabidopsis thaliana |
AT2G41960:exon:8 | 2283 | Chr2: 17514118-17516400 | Arabidopsis thaliana |
AT2G41960:exon:7 | 129 | Chr2: 17516505-17516633 | Arabidopsis thaliana |
AT2G41960:exon:6 | 132 | Chr2: 17516734-17516865 | Arabidopsis thaliana |
AT2G41960:exon:5 | 369 | Chr2: 17516981-17517349 | Arabidopsis thaliana |
AT2G41960:exon:4 | 142 | Chr2: 17517500-17517641 | Arabidopsis thaliana |
AT2G41960:exon:3 | 260 | Chr2: 17517935-17518194 | Arabidopsis thaliana |
AT2G41960:exon:2 | 339 | Chr2: 17518266-17518604 | Arabidopsis thaliana |
AT2G41960:exon:1 | 408 | Chr2: 17518896-17519303 | Arabidopsis thaliana |
AT2G09325:exon:1 | 210 | Chr2: 17514406-17514615 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G41960:five_prime_UTR:1 | 288 | Chr2: 17519016-17519303 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G41950 | locus:2064596 | AT2G41950 | 1160 | Chr2: 17513008-17514167 | A. thaliana | DNA-directed RNA polymerase subunit beta;(source:Araport11) | NULL | NULL | ||
AT2G09325 | AT2G09325 | 210 | Chr2: 17514406-17514615 | A. thaliana | Natural antisense transcript overlaps with AT2G41960;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G41950.1 | 1068 | Chr2: 17513008-17514167 |
AT2G41960.1 | 4062 | Chr2: 17514118-17519303 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G41950:three_prime_UTR:1 | 138 | Chr2: 17514030-17514167 | Arabidopsis thaliana |
AT2G41960:three_prime_UTR:1 | 126 | Chr2: 17514118-17514243 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE79090 | 103 | Chr2: 17516285-17516387 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE79090:transposon_fragment:1 | 103 | Chr2: 17516285-17516387 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...