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Gene : AT2G41800 A. thaliana

DB identifier  ? AT2G41800 Secondary Identifier  ? locus:2054336
Brief Description  imidazolonepropionase (Protein of unknown function, DUF642)
TAIR Computational Description  imidazolonepropionase (Protein of unknown function, DUF642);(source:Araport11)
TAIR Curator Summary  Encodes a DUF642 cell wall protein that is highly induced during the M/G1 phases of the cell cycle and is involved in hypocotyl cell elongation.
TAIR Short Description  Protein of unknown function, DUF642
TAIR Aliases  TEB

1 Gene Rifs

1 Organism

15 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1726  
Location: Chr2:17436443-17438168 reverse strand

Gene models - AT2G41800 AT2G41800

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TEEBE_ARATH developmental stage In primary roots, present in the meristematic zone as well as in the epidermal cells overlying the lateral root (LR) and in the emerging lateral root primordia (PubMed:27968989). In hypocotyls, expressed in epidermal cells (PubMed:27968989). Accumulates during early callus induction in the epidermal cells overlying the callus primordial present in the elongation zone of a primary root (PubMed:27968989).
TEEBE_ARATH function Prevents hypocotyl epidermal cells elongation by modulating the pectin status in cell walls (PubMed:27968989). Likely regulates pectin methylesterification degree during cell separation and elongation, including upon root-knot nematode Meloidogyne incognita infection (PubMed:27968989, PubMed:29238286).
TEEBE_ARATH subcellular location Accumulates at the cell wall upon root-knot nematode Meloidogyne incognita infection.
TEEBE_ARATH tissue specificity Expressed in primary and lateral roots, stigmatic papillae and hypocotyls.

1 Proteins

Function

Gene Ontology

cellular component
plasmodesma  ? ECO  
plant-type cell wall  ? ECO  
extracellular region  ? ECO  
molecular function
No terms in this category.
biological process
regulation of plant organ morphogenesis  ? ECO  
response to nematode  ? ECO  
negative regulation of unidimensional cell growth  ? ECO  
response to auxin  ? ECO  
regulation of cell wall pectin metabolic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets