help  | faq  | software  | BAR
Hide

Oops!

Error: Could not parse response to GET https://phytozome-next.jgi.doe.gov/phytomine/service/summaryfields: "" (0: SyntaxError: Unexpected end of JSON input)
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Transposable Element Gene : AT2G41580 A. thaliana

DB identifier  AT2G41580 Secondary Identifier  locus:2062642
Brief Description  transposable_element_gene
TAIR Computational Description  transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 4.7e-42 P-value blast match to GB:NP_038602 L1 repeat, Tf subfamily, member 18 (LINE-element) (Mus musculus);(source:TAIR10)
TAIR Curator Summary  NULL
TAIR Short Description  transposable element gene

0 Gene Rifs

1 Organism

1 Publications

Genomics

Genome feature

Region: transposable_element_gene ? Length: 3285  
Location: Chr2:17339804-17343088

Gene models -

? Gene models

No results

Overlapping Features

? Genome features that overlap coordinates of this TransposableElementGene

2 Child Features

0 Cross References

1 Downstream Intergenic Region

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
No terms in this category.
biological process
No terms in this category.

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

3 Data Sets