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Gene : CYP98A3 A. thaliana

DB identifier  ? AT2G40890 Secondary Identifier  ? locus:2058440
Name  ? cytochrome P450, family 98, subfamily A, polypeptide 3 Brief Description  cytochrome P450, family 98, subfamily A, polypeptide 3
TAIR Computational Description  cytochrome P450, family 98, subfamily A, polypeptide 3;(source:Araport11)
TAIR Curator Summary  encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.
TAIR Short Description  cytochrome P450, family 98, subfamily A, polypeptide 3
TAIR Aliases  CYP98A3, REF8

2 Gene Rifs

1 Organism

26 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2600  
Location: Chr2:17058053-17060652 reverse strand

Gene models - CYP98A3 AT2G40890

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
C98A3_ARATH function Cytochrome P450 which catalyzes 3'-hydroxylation of p-coumaric esters of shikimic/quinic acids to form lignin monomers. Can use p-coumarate, p-coumaraldehyde, p-coumaroyl methyl ester, 5-O-(4-coumaroyl) D-quinate and 5-O-(4-coumaroyl) shikimate as substrates, but not p-coumaryl alcohol, p-coumaroyl CoA, 1-O-p-coumaroyl-beta-D-glucose, p-hydroxy-cinnamyl alcohol, cinnamate, caffeate or ferulate. Has a weak activity on tri(p-coumaroyl)spermidine, but none on triferuloylspermidine. Hydroxylates preferentially the 5-O-isomer, but can also convert the 4-O- and 3-O-isomers with a lower efficiency. Involved in the biosynthesis of the coumarins scopoletin and scopolin. Essential for the biosynthesis of lignin.
C98A3_ARATH similarity Belongs to the cytochrome P450 family.
C98A3_ARATH tissue specificity Highly expressed in stems, roots and siliques. Detected in leaves flowers and seedlings. Highest expression detected in differentiating xylem.

1 Proteins

Function

Interactions

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets