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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40435:CDS:1 | 78 | Chr2: 16887048-16887125 | Arabidopsis thaliana |
AT2G40435:CDS:2 | 132 | Chr2: 16887571-16887702 | Arabidopsis thaliana |
AT2G40435:CDS:4 | 183 | Chr2: 16887824-16888006 | Arabidopsis thaliana |
AT2G40435:CDS:1.1 | 78 | Chr2: 16887048-16887125 | Arabidopsis thaliana |
AT2G40435:CDS:2.1 | 132 | Chr2: 16887571-16887702 | Arabidopsis thaliana |
AT2G40435:CDS:3 | 171 | Chr2: 16887824-16887994 | Arabidopsis thaliana |
AT2G40435:CDS:5 | 96 | Chr2: 16888312-16888407 | Arabidopsis thaliana |
AT2G40435:CDS:1.2 | 78 | Chr2: 16887048-16887125 | Arabidopsis thaliana |
AT2G40435:CDS:2.2 | 132 | Chr2: 16887571-16887702 | Arabidopsis thaliana |
AT2G40435:CDS:3.1 | 171 | Chr2: 16887824-16887994 | Arabidopsis thaliana |
AT2G40435:CDS:6 | 15 | Chr2: 16889053-16889067 | Arabidopsis thaliana |
AT2G40440:CDS:2 | 150 | Chr2: 16889212-16889361 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40435:exon:5 | 815 | Chr2: 16887824-16888638 | Arabidopsis thaliana |
AT2G40435:exon:1 | 359 | Chr2: 16886767-16887125 | Arabidopsis thaliana |
AT2G40435:exon:6 | 327 | Chr2: 16888312-16888638 | Arabidopsis thaliana |
AT2G40435:exon:2 | 302 | Chr2: 16886824-16887125 | Arabidopsis thaliana |
AT2G40435:exon:3 | 132 | Chr2: 16887571-16887702 | Arabidopsis thaliana |
AT2G40435:exon:4 | 171 | Chr2: 16887824-16887994 | Arabidopsis thaliana |
AT2G40435:exon:7 | 191 | Chr2: 16889053-16889243 | Arabidopsis thaliana |
AT2G40440:exon:2 | 150 | Chr2: 16889212-16889361 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40435:five_prime_UTR:1 | 281 | Chr2: 16886767-16887047 | Arabidopsis thaliana |
AT2G40435:five_prime_UTR:2 | 224 | Chr2: 16886824-16887047 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G40440 | locus:2061888 | AT2G40440 | 369 | Chr2: 16889212-16889580 | A. thaliana | BTB/POZ domain protein;(source:Araport11) | NULL | BTB/POZ domain-containing protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G40435.2 | 1306 | Chr2: 16886767-16888638 |
AT2G40435.1 | 989 | Chr2: 16886767-16888638 |
AT2G40435.3 | 796 | Chr2: 16886824-16889243 |
AT2G40440.1 | 273 | Chr2: 16889212-16889580 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40435:three_prime_UTR:1 | 632 | Chr2: 16888007-16888638 | Arabidopsis thaliana |
AT2G40435:three_prime_UTR:2 | 231 | Chr2: 16888408-16888638 | Arabidopsis thaliana |
AT2G40435:three_prime_UTR:3 | 176 | Chr2: 16889068-16889243 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...