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Gene : ELF4 A. thaliana

DB identifier  ? AT2G40080 Secondary Identifier  ? locus:2061226
Name  ? EARLY FLOWERING 4 Brief Description  EARLY FLOWERING-like protein (DUF1313)
TAIR Computational Description  EARLY FLOWERING-like protein (DUF1313);(source:Araport11)
TAIR Curator Summary  Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.
TAIR Short Description  Protein of unknown function (DUF1313)
TAIR Aliases  ELF4

8 Gene Rifs

1 Organism

38 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 660  
Location: Chr2:16734294-16734953 reverse strand

Gene models - ELF4 AT2G40080

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ELF4_ARATH function Component of the central CCA1/LHY-TOC1 feedback loop in the circadian clock that promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. Part of a corepressor complex consisting of ELF4, ELF3, and LUX involved in the transcriptional regulation of APRR9. Increases ELF3 nuclear distribution and localization in nuclear bodies. Required for responsiveness to continuous red, by regulating phytochrome B (phyB) signaling (including during seedling de-etiolation) and gene expression. Mediates both entrainment to an environmental cycle and circadian rhythm sustainability under constant conditions. Controls flowering time. Necessary for light-induced expression of both CCA1 and LHY.
ELF4_ARATH similarity Belongs to the EARLY FLOWERING 4 family.
ELF4_ARATH subcellular location Diffuse distribution. Targeted to nuclear bodies after interaction with ELF3 (PubMed:22327739).

1 Proteins

Function

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets