External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40020:CDS:1 | 24 | Chr2: 16711420-16711443 | Arabidopsis thaliana |
AT2G40020:CDS:3 | 99 | Chr2: 16711802-16711900 | Arabidopsis thaliana |
AT2G40020:CDS:5 | 198 | Chr2: 16711995-16712192 | Arabidopsis thaliana |
AT2G40020:CDS:6 | 145 | Chr2: 16712365-16712509 | Arabidopsis thaliana |
AT2G40020:CDS:8 | 257 | Chr2: 16712597-16712853 | Arabidopsis thaliana |
AT2G40020:CDS:1.1 | 24 | Chr2: 16711420-16711443 | Arabidopsis thaliana |
AT2G40020:CDS:3.1 | 99 | Chr2: 16711802-16711900 | Arabidopsis thaliana |
AT2G40020:CDS:5.1 | 198 | Chr2: 16711995-16712192 | Arabidopsis thaliana |
AT2G40020:CDS:7 | 228 | Chr2: 16712365-16712592 | Arabidopsis thaliana |
AT2G40020:CDS:4 | 87 | Chr2: 16711814-16711900 | Arabidopsis thaliana |
AT2G40020:CDS:5.2 | 198 | Chr2: 16711995-16712192 | Arabidopsis thaliana |
AT2G40020:CDS:6.1 | 145 | Chr2: 16712365-16712509 | Arabidopsis thaliana |
AT2G40020:CDS:8.1 | 257 | Chr2: 16712597-16712853 | Arabidopsis thaliana |
AT2G40020:CDS:2 | 138 | Chr2: 16711763-16711900 | Arabidopsis thaliana |
AT2G40020:CDS:5.3 | 198 | Chr2: 16711995-16712192 | Arabidopsis thaliana |
AT2G40020:CDS:6.2 | 145 | Chr2: 16712365-16712509 | Arabidopsis thaliana |
AT2G40020:CDS:8.2 | 257 | Chr2: 16712597-16712853 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40020:exon:11 | 743 | Chr2: 16712597-16713339 | Arabidopsis thaliana |
AT2G40020:exon:1 | 136 | Chr2: 16710929-16711064 | Arabidopsis thaliana |
AT2G40020:exon:3 | 45 | Chr2: 16711399-16711443 | Arabidopsis thaliana |
AT2G40020:exon:8 | 975 | Chr2: 16712365-16713339 | Arabidopsis thaliana |
AT2G40020:exon:2 | 86 | Chr2: 16710979-16711064 | Arabidopsis thaliana |
AT2G40020:exon:5 | 99 | Chr2: 16711802-16711900 | Arabidopsis thaliana |
AT2G40020:exon:9 | 422 | Chr2: 16712597-16713018 | Arabidopsis thaliana |
AT2G40020:exon:4 | 423 | Chr2: 16711478-16711900 | Arabidopsis thaliana |
AT2G40020:exon:6 | 198 | Chr2: 16711995-16712192 | Arabidopsis thaliana |
AT2G40020:exon:7 | 145 | Chr2: 16712365-16712509 | Arabidopsis thaliana |
AT2G40020:exon:10 | 654 | Chr2: 16712597-16713250 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40020:five_prime_UTR:1 | 136 | Chr2: 16710929-16711064 | Arabidopsis thaliana |
AT2G40020:five_prime_UTR:3 | 21 | Chr2: 16711399-16711419 | Arabidopsis thaliana |
AT2G40020:five_prime_UTR:2 | 86 | Chr2: 16710979-16711064 | Arabidopsis thaliana |
AT2G40020:five_prime_UTR:5 | 12 | Chr2: 16711802-16711813 | Arabidopsis thaliana |
AT2G40020:five_prime_UTR:4 | 285 | Chr2: 16711478-16711762 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G40020.3 | 1366 | Chr2: 16710929-16713339 |
AT2G40020.2 | 1453 | Chr2: 16710929-16713339 |
AT2G40020.1 | 950 | Chr2: 16710979-16713018 |
AT2G40020.4 | 1420 | Chr2: 16711478-16713250 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40020:three_prime_UTR:4 | 486 | Chr2: 16712854-16713339 | Arabidopsis thaliana |
AT2G40020:three_prime_UTR:1 | 747 | Chr2: 16712593-16713339 | Arabidopsis thaliana |
AT2G40020:three_prime_UTR:2 | 165 | Chr2: 16712854-16713018 | Arabidopsis thaliana |
AT2G40020:three_prime_UTR:3 | 397 | Chr2: 16712854-16713250 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
methyltransferase activity | ECO |
biological process | |
methylation | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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