External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G39690:CDS:3 | 117 | Chr2: 16541165-16541281 | Arabidopsis thaliana |
AT2G39690:CDS:4 | 328 | Chr2: 16541363-16541690 | Arabidopsis thaliana |
AT2G39690:CDS:6 | 391 | Chr2: 16541765-16542155 | Arabidopsis thaliana |
AT2G39690:CDS:7 | 100 | Chr2: 16542251-16542350 | Arabidopsis thaliana |
AT2G39690:CDS:8 | 60 | Chr2: 16542446-16542505 | Arabidopsis thaliana |
AT2G39690:CDS:9 | 84 | Chr2: 16542600-16542683 | Arabidopsis thaliana |
AT2G39690:CDS:11 | 111 | Chr2: 16542762-16542872 | Arabidopsis thaliana |
AT2G39690:CDS:15 | 309 | Chr2: 16542959-16543267 | Arabidopsis thaliana |
AT2G39690:CDS:3.1 | 117 | Chr2: 16541165-16541281 | Arabidopsis thaliana |
AT2G39690:CDS:4.1 | 328 | Chr2: 16541363-16541690 | Arabidopsis thaliana |
AT2G39690:CDS:6.1 | 391 | Chr2: 16541765-16542155 | Arabidopsis thaliana |
AT2G39690:CDS:7.1 | 100 | Chr2: 16542251-16542350 | Arabidopsis thaliana |
AT2G39690:CDS:8.1 | 60 | Chr2: 16542446-16542505 | Arabidopsis thaliana |
AT2G39690:CDS:10 | 117 | Chr2: 16542600-16542716 | Arabidopsis thaliana |
AT2G39690:CDS:1 | 75 | Chr2: 16541022-16541096 | Arabidopsis thaliana |
AT2G39690:CDS:2 | 120 | Chr2: 16541162-16541281 | Arabidopsis thaliana |
AT2G39690:CDS:4.2 | 328 | Chr2: 16541363-16541690 | Arabidopsis thaliana |
AT2G39690:CDS:6.2 | 391 | Chr2: 16541765-16542155 | Arabidopsis thaliana |
AT2G39690:CDS:7.2 | 100 | Chr2: 16542251-16542350 | Arabidopsis thaliana |
AT2G39690:CDS:8.2 | 60 | Chr2: 16542446-16542505 | Arabidopsis thaliana |
AT2G39690:CDS:9.1 | 84 | Chr2: 16542600-16542683 | Arabidopsis thaliana |
AT2G39690:CDS:11.1 | 111 | Chr2: 16542762-16542872 | Arabidopsis thaliana |
AT2G39690:CDS:15.1 | 309 | Chr2: 16542959-16543267 | Arabidopsis thaliana |
AT2G39690:CDS:1.1 | 75 | Chr2: 16541022-16541096 | Arabidopsis thaliana |
AT2G39690:CDS:2.1 | 120 | Chr2: 16541162-16541281 | Arabidopsis thaliana |
AT2G39690:CDS:4.3 | 328 | Chr2: 16541363-16541690 | Arabidopsis thaliana |
AT2G39690:CDS:6.3 | 391 | Chr2: 16541765-16542155 | Arabidopsis thaliana |
AT2G39690:CDS:7.3 | 100 | Chr2: 16542251-16542350 | Arabidopsis thaliana |
AT2G39690:CDS:8.3 | 60 | Chr2: 16542446-16542505 | Arabidopsis thaliana |
AT2G39690:CDS:9.2 | 84 | Chr2: 16542600-16542683 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G39690:exon:2 | 355 | Chr2: 16540927-16541281 | Arabidopsis thaliana |
AT2G39690:exon:13 | 273 | Chr2: 16542600-16542872 | Arabidopsis thaliana |
AT2G39690:exon:1 | 170 | Chr2: 16540927-16541096 | Arabidopsis thaliana |
AT2G39690:exon:20 | 453 | Chr2: 16542959-16543411 | Arabidopsis thaliana |
AT2G39690:exon:17 | 614 | Chr2: 16542765-16543378 | Arabidopsis thaliana |
AT2G39690:exon:15 | 620 | Chr2: 16542762-16543381 | Arabidopsis thaliana |
AT2G39690:exon:4 | 310 | Chr2: 16540972-16541281 | Arabidopsis thaliana |
AT2G39690:exon:3 | 125 | Chr2: 16540972-16541096 | Arabidopsis thaliana |
AT2G39690:exon:6 | 120 | Chr2: 16541162-16541281 | Arabidopsis thaliana |
AT2G39690:exon:16 | 108 | Chr2: 16542765-16542872 | Arabidopsis thaliana |
AT2G39690:exon:19 | 431 | Chr2: 16542959-16543389 | Arabidopsis thaliana |
AT2G39690:exon:5 | 71 | Chr2: 16541026-16541096 | Arabidopsis thaliana |
AT2G39690:exon:7 | 104 | Chr2: 16541178-16541281 | Arabidopsis thaliana |
AT2G39690:exon:8 | 328 | Chr2: 16541363-16541690 | Arabidopsis thaliana |
AT2G39690:exon:9 | 391 | Chr2: 16541765-16542155 | Arabidopsis thaliana |
AT2G39690:exon:10 | 100 | Chr2: 16542251-16542350 | Arabidopsis thaliana |
AT2G39690:exon:11 | 60 | Chr2: 16542446-16542505 | Arabidopsis thaliana |
AT2G39690:exon:12 | 84 | Chr2: 16542600-16542683 | Arabidopsis thaliana |
AT2G39690:exon:14 | 111 | Chr2: 16542762-16542872 | Arabidopsis thaliana |
AT2G39690:exon:18 | 420 | Chr2: 16542959-16543378 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G39690:five_prime_UTR:2 | 238 | Chr2: 16540927-16541164 | Arabidopsis thaliana |
AT2G39690:five_prime_UTR:1 | 95 | Chr2: 16540927-16541021 | Arabidopsis thaliana |
AT2G39690:five_prime_UTR:4 | 193 | Chr2: 16540972-16541164 | Arabidopsis thaliana |
AT2G39690:five_prime_UTR:3 | 50 | Chr2: 16540972-16541021 | Arabidopsis thaliana |
AT2G39690:five_prime_UTR:5 | 71 | Chr2: 16541026-16541096 | Arabidopsis thaliana |
AT2G39690:five_prime_UTR:6 | 104 | Chr2: 16541178-16541281 | Arabidopsis thaliana |
AT2G39690:five_prime_UTR:7 | 126 | Chr2: 16541363-16541488 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G39690.4 | 1882 | Chr2: 16540927-16543411 |
AT2G39690.3 | 1960 | Chr2: 16540927-16543411 |
AT2G39690.5 | 1817 | Chr2: 16540927-16543411 |
AT2G39690.7 | 1822 | Chr2: 16540972-16543378 |
AT2G39690.6 | 1828 | Chr2: 16540972-16543381 |
AT2G39690.8 | 1812 | Chr2: 16540972-16543389 |
AT2G39690.1 | 1747 | Chr2: 16540972-16543389 |
AT2G39690.2 | 1669 | Chr2: 16541026-16543378 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G39690:three_prime_UTR:1 | 156 | Chr2: 16542717-16542872 | Arabidopsis thaliana |
AT2G39690:three_prime_UTR:4 | 453 | Chr2: 16542959-16543411 | Arabidopsis thaliana |
AT2G39690:three_prime_UTR:7 | 144 | Chr2: 16543268-16543411 | Arabidopsis thaliana |
AT2G39690:three_prime_UTR:2 | 476 | Chr2: 16542903-16543378 | Arabidopsis thaliana |
AT2G39690:three_prime_UTR:3 | 479 | Chr2: 16542903-16543381 | Arabidopsis thaliana |
AT2G39690:three_prime_UTR:6 | 122 | Chr2: 16543268-16543389 | Arabidopsis thaliana |
AT2G39690:three_prime_UTR:5 | 111 | Chr2: 16543268-16543378 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...