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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G39190:CDS:1 | 328 | Chr2: 16350140-16350467 | Arabidopsis thaliana |
AT2G39190:CDS:2 | 176 | Chr2: 16350876-16351051 | Arabidopsis thaliana |
AT2G39190:CDS:3 | 142 | Chr2: 16351238-16351379 | Arabidopsis thaliana |
AT2G39190:CDS:4 | 53 | Chr2: 16351503-16351555 | Arabidopsis thaliana |
AT2G39190:CDS:5 | 144 | Chr2: 16351717-16351860 | Arabidopsis thaliana |
AT2G39190:CDS:6 | 105 | Chr2: 16351952-16352056 | Arabidopsis thaliana |
AT2G39190:CDS:7 | 126 | Chr2: 16352142-16352267 | Arabidopsis thaliana |
AT2G39190:CDS:9 | 51 | Chr2: 16352630-16352680 | Arabidopsis thaliana |
AT2G39190:CDS:1.1 | 328 | Chr2: 16350140-16350467 | Arabidopsis thaliana |
AT2G39190:CDS:2.1 | 176 | Chr2: 16350876-16351051 | Arabidopsis thaliana |
AT2G39190:CDS:3.1 | 142 | Chr2: 16351238-16351379 | Arabidopsis thaliana |
AT2G39190:CDS:4.1 | 53 | Chr2: 16351503-16351555 | Arabidopsis thaliana |
AT2G39190:CDS:5.1 | 144 | Chr2: 16351717-16351860 | Arabidopsis thaliana |
AT2G39190:CDS:6.1 | 105 | Chr2: 16351952-16352056 | Arabidopsis thaliana |
AT2G39190:CDS:7.1 | 126 | Chr2: 16352142-16352267 | Arabidopsis thaliana |
AT2G39190:CDS:8 | 198 | Chr2: 16352626-16352823 | Arabidopsis thaliana |
AT2G39190:CDS:10 | 107 | Chr2: 16353104-16353210 | Arabidopsis thaliana |
AT2G39190:CDS:11 | 163 | Chr2: 16353300-16353462 | Arabidopsis thaliana |
AT2G39190:CDS:12 | 66 | Chr2: 16353579-16353644 | Arabidopsis thaliana |
AT2G39190:CDS:13 | 94 | Chr2: 16354003-16354096 | Arabidopsis thaliana |
AT2G39190:CDS:14 | 113 | Chr2: 16354281-16354393 | Arabidopsis thaliana |
AT2G39190:CDS:15 | 71 | Chr2: 16354496-16354566 | Arabidopsis thaliana |
AT2G39190:CDS:16 | 154 | Chr2: 16354958-16355111 | Arabidopsis thaliana |
AT2G39190:CDS:17 | 405 | Chr2: 16355341-16355745 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G39190:exon:9 | 194 | Chr2: 16352630-16352823 | Arabidopsis thaliana |
AT2G39190:exon:16 | 67 | Chr2: 16354500-16354566 | Arabidopsis thaliana |
AT2G39190:exon:18 | 611 | Chr2: 16355341-16355951 | Arabidopsis thaliana |
AT2G39190:exon:1 | 500 | Chr2: 16349968-16350467 | Arabidopsis thaliana |
AT2G39190:exon:2 | 176 | Chr2: 16350876-16351051 | Arabidopsis thaliana |
AT2G39190:exon:3 | 142 | Chr2: 16351238-16351379 | Arabidopsis thaliana |
AT2G39190:exon:4 | 53 | Chr2: 16351503-16351555 | Arabidopsis thaliana |
AT2G39190:exon:5 | 144 | Chr2: 16351717-16351860 | Arabidopsis thaliana |
AT2G39190:exon:6 | 105 | Chr2: 16351952-16352056 | Arabidopsis thaliana |
AT2G39190:exon:7 | 126 | Chr2: 16352142-16352267 | Arabidopsis thaliana |
AT2G39190:exon:8 | 198 | Chr2: 16352626-16352823 | Arabidopsis thaliana |
AT2G39190:exon:10 | 107 | Chr2: 16353104-16353210 | Arabidopsis thaliana |
AT2G39190:exon:11 | 163 | Chr2: 16353300-16353462 | Arabidopsis thaliana |
AT2G39190:exon:12 | 66 | Chr2: 16353579-16353644 | Arabidopsis thaliana |
AT2G39190:exon:13 | 94 | Chr2: 16354003-16354096 | Arabidopsis thaliana |
AT2G39190:exon:14 | 113 | Chr2: 16354281-16354393 | Arabidopsis thaliana |
AT2G39190:exon:15 | 71 | Chr2: 16354496-16354566 | Arabidopsis thaliana |
AT2G39190:exon:17 | 154 | Chr2: 16354958-16355111 | Arabidopsis thaliana |
AT2G39190:exon:19 | 757 | Chr2: 16355341-16356097 | Arabidopsis thaliana |
AT2G39200:exon:15 | 658 | Chr2: 16356041-16356698 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G39190:five_prime_UTR:1 | 172 | Chr2: 16349968-16350139 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G39200 | locus:2056113 | MLO12 | MILDEW RESISTANCE LOCUS O 12 | 3903 | Chr2: 16356041-16359943 | A. thaliana | Seven transmembrane MLO family protein;(source:Araport11) | A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). | Seven transmembrane MLO family protein | ATMLO12, MLO12 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G39190.1 | 2815 | Chr2: 16349968-16355951 |
AT2G39190.2 | 2969 | Chr2: 16349968-16356097 |
AT2G39200.1 | 2091 | Chr2: 16356041-16359943 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G39190:three_prime_UTR:1 | 143 | Chr2: 16352681-16352823 | Arabidopsis thaliana |
AT2G39190:three_prime_UTR:2 | 107 | Chr2: 16353104-16353210 | Arabidopsis thaliana |
AT2G39190:three_prime_UTR:3 | 163 | Chr2: 16353300-16353462 | Arabidopsis thaliana |
AT2G39190:three_prime_UTR:4 | 66 | Chr2: 16353579-16353644 | Arabidopsis thaliana |
AT2G39190:three_prime_UTR:5 | 94 | Chr2: 16354003-16354096 | Arabidopsis thaliana |
AT2G39190:three_prime_UTR:6 | 113 | Chr2: 16354281-16354393 | Arabidopsis thaliana |
AT2G39190:three_prime_UTR:7 | 67 | Chr2: 16354500-16354566 | Arabidopsis thaliana |
AT2G39190:three_prime_UTR:8 | 154 | Chr2: 16354958-16355111 | Arabidopsis thaliana |
AT2G39190:three_prime_UTR:9 | 611 | Chr2: 16355341-16355951 | Arabidopsis thaliana |
AT2G39190:three_prime_UTR:10 | 352 | Chr2: 16355746-16356097 | Arabidopsis thaliana |
AT2G39200:three_prime_UTR:1 | 214 | Chr2: 16356041-16356254 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A654F063_ARATH Q94AB3_ARATH | similarity | Belongs to the protein kinase superfamily. ADCK protein kinase family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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