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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G38890:CDS:1 | 31 | Chr2: 16241095-16241125 | Arabidopsis thaliana |
AT2G38890:CDS:2 | 102 | Chr2: 16241205-16241306 | Arabidopsis thaliana |
AT2G38890:CDS:4 | 147 | Chr2: 16241396-16241542 | Arabidopsis thaliana |
AT2G38890:CDS:5 | 224 | Chr2: 16241696-16241919 | Arabidopsis thaliana |
AT2G38890:CDS:6 | 160 | Chr2: 16242000-16242159 | Arabidopsis thaliana |
AT2G38890:CDS:7 | 158 | Chr2: 16242257-16242414 | Arabidopsis thaliana |
AT2G38890:CDS:8 | 138 | Chr2: 16242511-16242648 | Arabidopsis thaliana |
AT2G38890:CDS:3 | 73 | Chr2: 16241234-16241306 | Arabidopsis thaliana |
AT2G38890:CDS:4.1 | 147 | Chr2: 16241396-16241542 | Arabidopsis thaliana |
AT2G38890:CDS:5.1 | 224 | Chr2: 16241696-16241919 | Arabidopsis thaliana |
AT2G38890:CDS:6.1 | 160 | Chr2: 16242000-16242159 | Arabidopsis thaliana |
AT2G38890:CDS:7.1 | 158 | Chr2: 16242257-16242414 | Arabidopsis thaliana |
AT2G38890:CDS:10 | 118 | Chr2: 16242557-16242674 | Arabidopsis thaliana |
AT2G38890:CDS:11 | 56 | Chr2: 16242776-16242831 | Arabidopsis thaliana |
AT2G38890:CDS:3.1 | 73 | Chr2: 16241234-16241306 | Arabidopsis thaliana |
AT2G38890:CDS:4.2 | 147 | Chr2: 16241396-16241542 | Arabidopsis thaliana |
AT2G38890:CDS:5.2 | 224 | Chr2: 16241696-16241919 | Arabidopsis thaliana |
AT2G38890:CDS:6.2 | 160 | Chr2: 16242000-16242159 | Arabidopsis thaliana |
AT2G38890:CDS:7.2 | 158 | Chr2: 16242257-16242414 | Arabidopsis thaliana |
AT2G38890:CDS:8.1 | 138 | Chr2: 16242511-16242648 | Arabidopsis thaliana |
AT2G38890:CDS:3.2 | 73 | Chr2: 16241234-16241306 | Arabidopsis thaliana |
AT2G38890:CDS:4.3 | 147 | Chr2: 16241396-16241542 | Arabidopsis thaliana |
AT2G38890:CDS:5.3 | 224 | Chr2: 16241696-16241919 | Arabidopsis thaliana |
AT2G38890:CDS:6.3 | 160 | Chr2: 16242000-16242159 | Arabidopsis thaliana |
AT2G38890:CDS:7.3 | 158 | Chr2: 16242257-16242414 | Arabidopsis thaliana |
AT2G38890:CDS:9 | 135 | Chr2: 16242514-16242648 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G08980:exon:1 | 201 | Chr2: 16240917-16241117 | Arabidopsis thaliana |
AT2G38890:exon:1 | 49 | Chr2: 16241077-16241125 | Arabidopsis thaliana |
AT2G38890:exon:3 | 102 | Chr2: 16241205-16241306 | Arabidopsis thaliana |
AT2G38890:exon:2 | 118 | Chr2: 16241189-16241306 | Arabidopsis thaliana |
AT2G38890:exon:11 | 118 | Chr2: 16242557-16242674 | Arabidopsis thaliana |
AT2G38890:exon:12 | 142 | Chr2: 16242776-16242917 | Arabidopsis thaliana |
AT2G38890:exon:9 | 407 | Chr2: 16242511-16242917 | Arabidopsis thaliana |
AT2G38890:exon:4 | 73 | Chr2: 16241234-16241306 | Arabidopsis thaliana |
AT2G38890:exon:5 | 147 | Chr2: 16241396-16241542 | Arabidopsis thaliana |
AT2G38890:exon:6 | 224 | Chr2: 16241696-16241919 | Arabidopsis thaliana |
AT2G38890:exon:7 | 160 | Chr2: 16242000-16242159 | Arabidopsis thaliana |
AT2G38890:exon:8 | 158 | Chr2: 16242257-16242414 | Arabidopsis thaliana |
AT2G38890:exon:10 | 404 | Chr2: 16242514-16242917 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G38890:five_prime_UTR:1 | 18 | Chr2: 16241077-16241094 | Arabidopsis thaliana |
AT2G38890:five_prime_UTR:2 | 45 | Chr2: 16241189-16241233 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G08980 | AT2G08980 | 201 | Chr2: 16240917-16241117 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G38890.3 | 1247 | Chr2: 16241077-16242917 |
AT2G38890.2 | 1067 | Chr2: 16241189-16242917 |
AT2G38890.4 | 1169 | Chr2: 16241234-16242917 |
AT2G38890.1 | 1166 | Chr2: 16241234-16242917 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G38890:three_prime_UTR:2 | 86 | Chr2: 16242832-16242917 | Arabidopsis thaliana |
AT2G38890:three_prime_UTR:1 | 269 | Chr2: 16242649-16242917 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
microtubule binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...