help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : TBL15 A. thaliana

DB identifier  ? AT2G37720 Secondary Identifier  ? locus:2040696
Name  ? TRICHOME BIREFRINGENCE-LIKE 15 Brief Description  TRICHOME BIREFRINGENCE-LIKE 15
TAIR Computational Description  TRICHOME BIREFRINGENCE-LIKE 15;(source:Araport11)
TAIR Curator Summary  Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
TAIR Short Description  TRICHOME BIREFRINGENCE-LIKE 15
TAIR Aliases  TBL15

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3230  
Location: Chr2:15818082-15821311

Gene models - TBL15 AT2G37720

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TBL15_ARATH function May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
TBL15_ARATH similarity Belongs to the PC-esterase family. TBL subfamily.

1 Proteins

Function

Gene Ontology

cellular component
Golgi apparatus  ? ECO  
membrane  ? ECO  
chloroplast  ? ECO  
molecular function
transferase activity  ? ECO  
biological process
xylan biosynthetic process  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets