External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 15, Exons: 14, Five Prime UTRs: 5, Genes: 3, mRNAs: 6, Pseudogene: 1, Pseudogenic Exon: 1, Pseudogenic Transcript: 1, Three Prime UTR: 1, Transposable Elements: 8, Transposable Element Gene: 1, Transposon Fragments: 8
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G34110:CDS:1 | 234 | Chr2: 14402500-14402733 | Arabidopsis thaliana |
AT2G34110:CDS:2 | 138 | Chr2: 14403180-14403317 | Arabidopsis thaliana |
AT2G34100:CDS:5 | 309 | Chr2: 14399705-14400013 | Arabidopsis thaliana |
AT2G34100:CDS:4 | 273 | Chr2: 14400143-14400415 | Arabidopsis thaliana |
AT2G34100:CDS:3 | 113 | Chr2: 14400563-14400675 | Arabidopsis thaliana |
AT2G34100:CDS:2 | 253 | Chr2: 14400803-14401055 | Arabidopsis thaliana |
AT2G34100:CDS:1 | 90 | Chr2: 14401566-14401655 | Arabidopsis thaliana |
AT2G34100:CDS:5.1 | 309 | Chr2: 14399705-14400013 | Arabidopsis thaliana |
AT2G34100:CDS:4.1 | 273 | Chr2: 14400143-14400415 | Arabidopsis thaliana |
AT2G34100:CDS:3.1 | 113 | Chr2: 14400563-14400675 | Arabidopsis thaliana |
AT2G34100:CDS:2.1 | 253 | Chr2: 14400803-14401055 | Arabidopsis thaliana |
AT2G34100:CDS:1.1 | 90 | Chr2: 14401566-14401655 | Arabidopsis thaliana |
AT2G34120:CDS:1 | 213 | Chr2: 14405339-14405551 | Arabidopsis thaliana |
AT2G34123:CDS:1 | 67 | Chr2: 14406240-14406306 | Arabidopsis thaliana |
AT2G34123:CDS:2 | 179 | Chr2: 14406564-14406742 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G34110:exon:2 | 274 | Chr2: 14402460-14402733 | Arabidopsis thaliana |
AT2G34110:exon:3 | 138 | Chr2: 14403180-14403317 | Arabidopsis thaliana |
AT2G34100:exon:3 | 52 | Chr2: 14401870-14401921 | Arabidopsis thaliana |
AT2G34100:exon:8 | 480 | Chr2: 14399534-14400013 | Arabidopsis thaliana |
AT2G34100:exon:7 | 273 | Chr2: 14400143-14400415 | Arabidopsis thaliana |
AT2G34100:exon:6 | 113 | Chr2: 14400563-14400675 | Arabidopsis thaliana |
AT2G34100:exon:5 | 253 | Chr2: 14400803-14401055 | Arabidopsis thaliana |
AT2G34100:exon:4 | 110 | Chr2: 14401566-14401675 | Arabidopsis thaliana |
AT2G34100:exon:2 | 49 | Chr2: 14413278-14413326 | Arabidopsis thaliana |
AT2G34100:exon:1 | 22 | Chr2: 14413468-14413489 | Arabidopsis thaliana |
AT2G34120:exon:1 | 213 | Chr2: 14405339-14405551 | Arabidopsis thaliana |
AT2G34123:exon:1 | 67 | Chr2: 14406240-14406306 | Arabidopsis thaliana |
AT2G34123:exon:2 | 179 | Chr2: 14406564-14406742 | Arabidopsis thaliana |
AT2G34130:exon:1 | 2877 | Chr2: 14409489-14412365 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G34110:five_prime_UTR:2 | 40 | Chr2: 14402460-14402499 | Arabidopsis thaliana |
AT2G34100:five_prime_UTR:3 | 52 | Chr2: 14401870-14401921 | Arabidopsis thaliana |
AT2G34100:five_prime_UTR:4 | 20 | Chr2: 14401656-14401675 | Arabidopsis thaliana |
AT2G34100:five_prime_UTR:2 | 49 | Chr2: 14413278-14413326 | Arabidopsis thaliana |
AT2G34100:five_prime_UTR:1 | 22 | Chr2: 14413468-14413489 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G34110 | locus:2055476 | AT2G34110 | 10767 | Chr2: 14392551-14403317 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL | ||
AT2G34120 | locus:2055486 | AT2G34120 | 213 | Chr2: 14405339-14405551 | A. thaliana | Cytochrome C oxidase polypeptide VIB family protein;(source:Araport11) | NULL | Cytochrome C oxidase polypeptide VIB family protein | ||
AT2G34123 | locus:1009023231 | AT2G34123 | 503 | Chr2: 14406240-14406742 | A. thaliana | Cysteine-rich protein;(source:Araport11) | Encodes a defensin-like (DEFL) family protein. | Cysteine-rich protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G34110.1 | 597 | Chr2: 14392551-14403317 |
AT2G34100.1 | 1281 | Chr2: 14399534-14401921 |
AT2G34100.2 | 1300 | Chr2: 14399534-14413489 |
AT2G34120.1 | 213 | Chr2: 14405339-14405551 |
AT2G34123.1 | 246 | Chr2: 14406240-14406742 |
AT2G34130.1 | 2877 | Chr2: 14409489-14412365 |
Pseudogenes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G34135 | locus:4010713674 | AT2G34135 | 138 | Chr2: 14412728-14412865 | A. thaliana | pseudogene of Cysteine-rich protein;(source:Araport11) | Encodes a Defensin-like (DEFL) family protein [pseudogene] | NULL |
Pseudogenic Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G34135:pseudogenic_exon:1 | 138 | Chr2: 14412728-14412865 | Arabidopsis thaliana |
Pseudogenic Transcripts
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G34135.1 | 138 | Chr2: 14412728-14412865 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G34100:three_prime_UTR:1 | 171 | Chr2: 14399534-14399704 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE63770 | 195 | Chr2: 14402228-14402422 | Arabidopsis thaliana |
AT2TE63775 | 431 | Chr2: 14403964-14404394 | Arabidopsis thaliana |
AT2TE63780 | 53 | Chr2: 14404427-14404479 | Arabidopsis thaliana |
AT2TE63785 | 169 | Chr2: 14405720-14405888 | Arabidopsis thaliana |
AT2TE63790 | 877 | Chr2: 14406700-14407576 | Arabidopsis thaliana |
AT2TE63795 | 34 | Chr2: 14407577-14407610 | Arabidopsis thaliana |
AT2TE63800 | 4543 | Chr2: 14407884-14412426 | Arabidopsis thaliana |
AT2TE63805 | 23 | Chr2: 14412427-14412449 | Arabidopsis thaliana |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G34130 | locus:2055496 | MEE19 | maternal effect embryo arrest 19 | 2877 | Chr2: 14409489-14412365 | A. thaliana | transposable_element_gene;(source:Araport11);CACTA-like transposase family (Ptta/En/Spm), has a 5.8e-123 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana);(source:TAIR10) | NULL | transposable element gene | MEE19 |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE63770:transposon_fragment:1 | 195 | Chr2: 14402228-14402422 | Arabidopsis thaliana |
AT2TE63775:transposon_fragment:1 | 431 | Chr2: 14403964-14404394 | Arabidopsis thaliana |
AT2TE63780:transposon_fragment:1 | 53 | Chr2: 14404427-14404479 | Arabidopsis thaliana |
AT2TE63785:transposon_fragment:1 | 169 | Chr2: 14405720-14405888 | Arabidopsis thaliana |
AT2TE63790:transposon_fragment:1 | 877 | Chr2: 14406700-14407576 | Arabidopsis thaliana |
AT2TE63795:transposon_fragment:1 | 34 | Chr2: 14407577-14407610 | Arabidopsis thaliana |
AT2TE63800:transposon_fragment:1 | 4543 | Chr2: 14407884-14412426 | Arabidopsis thaliana |
AT2TE63805:transposon_fragment:1 | 23 | Chr2: 14412427-14412449 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...