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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G32410:CDS:1 | 38 | Chr2: 13757702-13757739 | Arabidopsis thaliana |
AT2G32410:CDS:2 | 173 | Chr2: 13757848-13758020 | Arabidopsis thaliana |
AT2G32410:CDS:3 | 164 | Chr2: 13758114-13758277 | Arabidopsis thaliana |
AT2G32410:CDS:4 | 111 | Chr2: 13758371-13758481 | Arabidopsis thaliana |
AT2G32410:CDS:5 | 80 | Chr2: 13758568-13758647 | Arabidopsis thaliana |
AT2G32410:CDS:6 | 151 | Chr2: 13758778-13758928 | Arabidopsis thaliana |
AT2G32410:CDS:7 | 94 | Chr2: 13759023-13759116 | Arabidopsis thaliana |
AT2G32410:CDS:8 | 89 | Chr2: 13759366-13759454 | Arabidopsis thaliana |
AT2G32410:CDS:9 | 74 | Chr2: 13759658-13759731 | Arabidopsis thaliana |
AT2G32410:CDS:10 | 163 | Chr2: 13759829-13759991 | Arabidopsis thaliana |
AT2G32410:CDS:11 | 86 | Chr2: 13760062-13760147 | Arabidopsis thaliana |
AT2G32410:CDS:13 | 31 | Chr2: 13760254-13760284 | Arabidopsis thaliana |
AT2G32410:CDS:1.1 | 38 | Chr2: 13757702-13757739 | Arabidopsis thaliana |
AT2G32410:CDS:2.1 | 173 | Chr2: 13757848-13758020 | Arabidopsis thaliana |
AT2G32410:CDS:3.1 | 164 | Chr2: 13758114-13758277 | Arabidopsis thaliana |
AT2G32410:CDS:4.1 | 111 | Chr2: 13758371-13758481 | Arabidopsis thaliana |
AT2G32410:CDS:5.1 | 80 | Chr2: 13758568-13758647 | Arabidopsis thaliana |
AT2G32410:CDS:6.1 | 151 | Chr2: 13758778-13758928 | Arabidopsis thaliana |
AT2G32410:CDS:7.1 | 94 | Chr2: 13759023-13759116 | Arabidopsis thaliana |
AT2G32410:CDS:8.1 | 89 | Chr2: 13759366-13759454 | Arabidopsis thaliana |
AT2G32410:CDS:9.1 | 74 | Chr2: 13759658-13759731 | Arabidopsis thaliana |
AT2G32410:CDS:10.1 | 163 | Chr2: 13759829-13759991 | Arabidopsis thaliana |
AT2G32410:CDS:12 | 90 | Chr2: 13760062-13760151 | Arabidopsis thaliana |
AT2G32410:CDS:1.2 | 38 | Chr2: 13757702-13757739 | Arabidopsis thaliana |
AT2G32410:CDS:2.2 | 173 | Chr2: 13757848-13758020 | Arabidopsis thaliana |
AT2G32410:CDS:3.2 | 164 | Chr2: 13758114-13758277 | Arabidopsis thaliana |
AT2G32410:CDS:4.2 | 111 | Chr2: 13758371-13758481 | Arabidopsis thaliana |
AT2G32410:CDS:5.2 | 80 | Chr2: 13758568-13758647 | Arabidopsis thaliana |
AT2G32410:CDS:6.2 | 151 | Chr2: 13758778-13758928 | Arabidopsis thaliana |
AT2G32410:CDS:7.2 | 94 | Chr2: 13759023-13759116 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G32410:exon:13 | 157 | Chr2: 13760254-13760410 | Arabidopsis thaliana |
AT2G32410:exon:16 | 299 | Chr2: 13760779-13761077 | Arabidopsis thaliana |
AT2G32410:exon:12 | 349 | Chr2: 13760062-13760410 | Arabidopsis thaliana |
AT2G32410:exon:17 | 366 | Chr2: 13760779-13761144 | Arabidopsis thaliana |
AT2G32410:exon:1 | 147 | Chr2: 13757593-13757739 | Arabidopsis thaliana |
AT2G32410:exon:2 | 173 | Chr2: 13757848-13758020 | Arabidopsis thaliana |
AT2G32410:exon:3 | 164 | Chr2: 13758114-13758277 | Arabidopsis thaliana |
AT2G32410:exon:4 | 111 | Chr2: 13758371-13758481 | Arabidopsis thaliana |
AT2G32410:exon:5 | 80 | Chr2: 13758568-13758647 | Arabidopsis thaliana |
AT2G32410:exon:6 | 151 | Chr2: 13758778-13758928 | Arabidopsis thaliana |
AT2G32410:exon:7 | 94 | Chr2: 13759023-13759116 | Arabidopsis thaliana |
AT2G32410:exon:8 | 89 | Chr2: 13759366-13759454 | Arabidopsis thaliana |
AT2G32410:exon:9 | 74 | Chr2: 13759658-13759731 | Arabidopsis thaliana |
AT2G32410:exon:10 | 163 | Chr2: 13759829-13759991 | Arabidopsis thaliana |
AT2G32410:exon:11 | 86 | Chr2: 13760062-13760147 | Arabidopsis thaliana |
AT2G32410:exon:14 | 84 | Chr2: 13760327-13760410 | Arabidopsis thaliana |
AT2G32410:exon:15 | 181 | Chr2: 13760497-13760677 | Arabidopsis thaliana |
AT2G32410:exon:18 | 374 | Chr2: 13760779-13761152 | Arabidopsis thaliana |
AT2G32415:exon:17 | 261 | Chr2: 13761110-13761370 | Arabidopsis thaliana |
AT2G32415:exon:16 | 234 | Chr2: 13761137-13761370 | Arabidopsis thaliana |
AT2G32415:exon:15 | 251 | Chr2: 13761142-13761392 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G32410:five_prime_UTR:1 | 109 | Chr2: 13757593-13757701 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G32415 | locus:504955936 | AT2G32415 | 4499 | Chr2: 13761110-13765608 | A. thaliana | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein;(source:Araport11) | NULL | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | AtRRP6L3, RRP6L3 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G32410.2 | 1969 | Chr2: 13757593-13761077 |
AT2G32410.3 | 2142 | Chr2: 13757593-13761144 |
AT2G32410.1 | 1971 | Chr2: 13757593-13761152 |
AT2G32415.3 | 3063 | Chr2: 13761110-13765608 |
AT2G32415.1 | 2881 | Chr2: 13761137-13765456 |
AT2G32415.2 | 2898 | Chr2: 13761142-13765456 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G32410:three_prime_UTR:2 | 126 | Chr2: 13760285-13760410 | Arabidopsis thaliana |
AT2G32410:three_prime_UTR:4 | 299 | Chr2: 13760779-13761077 | Arabidopsis thaliana |
AT2G32410:three_prime_UTR:1 | 259 | Chr2: 13760152-13760410 | Arabidopsis thaliana |
AT2G32410:three_prime_UTR:3 | 181 | Chr2: 13760497-13760677 | Arabidopsis thaliana |
AT2G32410:three_prime_UTR:5 | 366 | Chr2: 13760779-13761144 | Arabidopsis thaliana |
AT2G32410:three_prime_UTR:6 | 290 | Chr2: 13760863-13761152 | Arabidopsis thaliana |
AT2G32415:three_prime_UTR:3 | 197 | Chr2: 13761110-13761306 | Arabidopsis thaliana |
AT2G32415:three_prime_UTR:2 | 170 | Chr2: 13761137-13761306 | Arabidopsis thaliana |
AT2G32415:three_prime_UTR:1 | 244 | Chr2: 13761142-13761385 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
AXL1_ARATH | function | Regulatory subunit of the dimeric ECR1-AXL1 E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1 (Probable). May function redundantly with AXR1 in the RUB conjugating pathway (PubMed:17655650). Seems not to be functionally equivalent to AXR1 in vivo (PubMed:21311953). |
AXL1_ARATH | pathway | Protein modification; protein neddylation. |
AXL1_ARATH | similarity | Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
peroxisome | ECO |
nucleus | ECO |
molecular function | |
nucleotide binding | ECO |
NEDD8 activating enzyme activity | ECO |
biological process | |
protein neddylation | ECO |
post-embryonic development | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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