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Gene : CHAL A. thaliana

DB identifier  ? AT2G30370 Secondary Identifier  ? locus:2065719
Name  ? CHALLAH Brief Description  allergen-like protein
TAIR Computational Description  allergen-like protein;(source:Araport11)
TAIR Curator Summary  Encodes a small, potentially secreted protein that acts as an inhibitor of stomatal production though likely not through direct interaction with the TMM receptor. It is homologous to known stomatal regulators EPF1 and EPF2. Member of the EPF/EPFL (epidermal patterning factor/EPF-like) gene family, which genes encode plant-specific secretory peptides, that function in a variety of signaling pathways controlling stomatal density and patterning, inflorescence architecture, and development of reproductive structures. Functions as a receptor ligand for ERECTA-SERK receptor complexes.
TAIR Short Description  allergen-related
TAIR Aliases  AtEPFL6, CHAL, EPFL6

2 Gene Rifs

1 Organism

18 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2481  
Location: Chr2:12940349-12942829 reverse strand

Gene models - CHAL AT2G30370

? Gene models

Transcripts: 3  Exons: 11  Introns: 8 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
EPFL6_ARATH-2 EPFL6_ARATH function Acts primarily as positive regulator of inflorescence growth. Endodermal expression is sufficient for proper inflorescence architecture (PubMed:22474391). Redundantly involved with EPFL4 in procambial development regulation. Acts also as tissue-specific regulator of epidermal pattern. Controls stomatal patterning by repressing stomatal production. TMM (AC Q9SSD1) functions to dampen or block CHAL signaling. Not processed by SDD1 (AC O64495). Acts as growth-regulatory ligand for ERECTA family receptors.
A0A1P8B1K2_ARATH A0A178VW02_ARATH function Controls stomatal patterning.
EPFL6_ARATH-2 A0A1P8B1K2_ARATH EPFL6_ARATH A0A178VW02_ARATH similarity Belongs to the plant cysteine rich small secretory peptide family. Epidermal patterning factor subfamily.
EPFL6_ARATH-2 EPFL6_ARATH tissue specificity Expressed in the internal layers of the root, hypocotyl and stems, and in the midrib of developing rosette leaves. Detected in a ring of cells surrounding the vascular elements. Expressed in developing stems soon after bolting, in inflorescence stems, near the root apex and in the chalazal region of ovules. Not found in cotyledons or in stomatal precursors or stomata.

4 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
molecular function
No terms in this category.
biological process
guard cell differentiation  ? ECO  
stomatal complex development  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets