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Gene : RAD51B A. thaliana

DB identifier  ? AT2G28560 Secondary Identifier  ? locus:2056583
Brief Description  DNA repair (Rad51) family protein
TAIR Computational Description  DNA repair (Rad51) family protein;(source:Araport11)
TAIR Curator Summary  Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.
TAIR Short Description  DNA repair (Rad51) family protein
TAIR Aliases  ATRAD51B, RAD51B

4 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3272  
Location: Chr2:12235875-12239146 reverse strand

Gene models - RAD51B AT2G28560

? Gene models

Transcripts: 6  Exons: 71  Introns: 65 

Overlapping Features

? Genome features that overlap coordinates of this Gene

30 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RA51B_ARATH-3 RA51B_ARATH RA51B_ARATH-2 function May be involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents.
RA51B_ARATH-3 RA51B_ARATH RA51B_ARATH-2 similarity Belongs to the RecA family. RAD51 subfamily.
RA51B_ARATH-3 RA51B_ARATH RA51B_ARATH-2 tissue specificity Preferentially expressed in flower buds and roots.

4 Proteins

Function

Gene Ontology

cellular component
Rad51B-Rad51C-Rad51D-XRCC2 complex  ? ECO  
molecular function
ATP binding  ? ECO  
ATP hydrolysis activity  ? ECO  
ATP-dependent DNA damage sensor activity  ? ECO  
DNA strand exchange activity  ? ECO  
DNA binding  ? ECO  
biological process
DNA repair  ? ECO  
double-strand break repair via homologous recombination  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets