Lists
This Gene is in one list:
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 35, Exons: 17, Five Prime UTRs: 4, mRNAs: 3, Three Prime UTRs: 3, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G26000:CDS:1 | 165 | Chr2: 11082403-11082567 | Arabidopsis thaliana |
AT2G26000:CDS:2 | 116 | Chr2: 11082669-11082784 | Arabidopsis thaliana |
AT2G26000:CDS:3 | 109 | Chr2: 11082989-11083097 | Arabidopsis thaliana |
AT2G26000:CDS:4 | 124 | Chr2: 11083190-11083313 | Arabidopsis thaliana |
AT2G26000:CDS:5 | 98 | Chr2: 11083473-11083570 | Arabidopsis thaliana |
AT2G26000:CDS:6 | 107 | Chr2: 11083659-11083765 | Arabidopsis thaliana |
AT2G26000:CDS:7 | 247 | Chr2: 11083861-11084107 | Arabidopsis thaliana |
AT2G26000:CDS:8 | 54 | Chr2: 11084239-11084292 | Arabidopsis thaliana |
AT2G26000:CDS:9 | 144 | Chr2: 11084432-11084575 | Arabidopsis thaliana |
AT2G26000:CDS:10 | 65 | Chr2: 11084682-11084746 | Arabidopsis thaliana |
AT2G26000:CDS:11 | 55 | Chr2: 11084840-11084894 | Arabidopsis thaliana |
AT2G26000:CDS:12 | 156 | Chr2: 11084982-11085137 | Arabidopsis thaliana |
AT2G26000:CDS:1.1 | 165 | Chr2: 11082403-11082567 | Arabidopsis thaliana |
AT2G26000:CDS:2.1 | 116 | Chr2: 11082669-11082784 | Arabidopsis thaliana |
AT2G26000:CDS:3.1 | 109 | Chr2: 11082989-11083097 | Arabidopsis thaliana |
AT2G26000:CDS:4.1 | 124 | Chr2: 11083190-11083313 | Arabidopsis thaliana |
AT2G26000:CDS:5.1 | 98 | Chr2: 11083473-11083570 | Arabidopsis thaliana |
AT2G26000:CDS:6.1 | 107 | Chr2: 11083659-11083765 | Arabidopsis thaliana |
AT2G26000:CDS:7.1 | 247 | Chr2: 11083861-11084107 | Arabidopsis thaliana |
AT2G26000:CDS:9.1 | 144 | Chr2: 11084432-11084575 | Arabidopsis thaliana |
AT2G26000:CDS:10.1 | 65 | Chr2: 11084682-11084746 | Arabidopsis thaliana |
AT2G26000:CDS:11.1 | 55 | Chr2: 11084840-11084894 | Arabidopsis thaliana |
AT2G26000:CDS:12.1 | 156 | Chr2: 11084982-11085137 | Arabidopsis thaliana |
AT2G26000:CDS:1.2 | 165 | Chr2: 11082403-11082567 | Arabidopsis thaliana |
AT2G26000:CDS:2.2 | 116 | Chr2: 11082669-11082784 | Arabidopsis thaliana |
AT2G26000:CDS:3.2 | 109 | Chr2: 11082989-11083097 | Arabidopsis thaliana |
AT2G26000:CDS:4.2 | 124 | Chr2: 11083190-11083313 | Arabidopsis thaliana |
AT2G26000:CDS:5.2 | 98 | Chr2: 11083473-11083570 | Arabidopsis thaliana |
AT2G26000:CDS:6.2 | 107 | Chr2: 11083659-11083765 | Arabidopsis thaliana |
AT2G26000:CDS:7.2 | 247 | Chr2: 11083861-11084107 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G26000:exon:1 | 178 | Chr2: 11081156-11081333 | Arabidopsis thaliana |
AT2G26000:exon:16 | 369 | Chr2: 11084982-11085350 | Arabidopsis thaliana |
AT2G26000:exon:2 | 32 | Chr2: 11081302-11081333 | Arabidopsis thaliana |
AT2G26000:exon:4 | 226 | Chr2: 11082342-11082567 | Arabidopsis thaliana |
AT2G26000:exon:15 | 349 | Chr2: 11084982-11085330 | Arabidopsis thaliana |
AT2G26000:exon:3 | 850 | Chr2: 11081718-11082567 | Arabidopsis thaliana |
AT2G26000:exon:5 | 116 | Chr2: 11082669-11082784 | Arabidopsis thaliana |
AT2G26000:exon:6 | 109 | Chr2: 11082989-11083097 | Arabidopsis thaliana |
AT2G26000:exon:7 | 124 | Chr2: 11083190-11083313 | Arabidopsis thaliana |
AT2G26000:exon:8 | 98 | Chr2: 11083473-11083570 | Arabidopsis thaliana |
AT2G26000:exon:9 | 107 | Chr2: 11083659-11083765 | Arabidopsis thaliana |
AT2G26000:exon:10 | 247 | Chr2: 11083861-11084107 | Arabidopsis thaliana |
AT2G26000:exon:11 | 54 | Chr2: 11084239-11084292 | Arabidopsis thaliana |
AT2G26000:exon:12 | 144 | Chr2: 11084432-11084575 | Arabidopsis thaliana |
AT2G26000:exon:13 | 65 | Chr2: 11084682-11084746 | Arabidopsis thaliana |
AT2G26000:exon:14 | 55 | Chr2: 11084840-11084894 | Arabidopsis thaliana |
AT2G26000:exon:17 | 401 | Chr2: 11084982-11085382 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G26000:five_prime_UTR:1 | 178 | Chr2: 11081156-11081333 | Arabidopsis thaliana |
AT2G26000:five_prime_UTR:2 | 32 | Chr2: 11081302-11081333 | Arabidopsis thaliana |
AT2G26000:five_prime_UTR:4 | 61 | Chr2: 11082342-11082402 | Arabidopsis thaliana |
AT2G26000:five_prime_UTR:3 | 685 | Chr2: 11081718-11082402 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G26000.2 | 1892 | Chr2: 11081156-11085350 |
AT2G26000.1 | 1672 | Chr2: 11081302-11085330 |
AT2G26000.3 | 2370 | Chr2: 11081718-11085382 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G26000:three_prime_UTR:2 | 213 | Chr2: 11085138-11085350 | Arabidopsis thaliana |
AT2G26000:three_prime_UTR:1 | 193 | Chr2: 11085138-11085330 | Arabidopsis thaliana |
AT2G26000:three_prime_UTR:3 | 245 | Chr2: 11085138-11085382 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE47785 | 322 | Chr2: 11080914-11081235 | Arabidopsis thaliana |
AT2TE47790 | 463 | Chr2: 11081250-11081712 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE47785:transposon_fragment:1 | 322 | Chr2: 11080914-11081235 | Arabidopsis thaliana |
AT2TE47790:transposon_fragment:1 | 463 | Chr2: 11081250-11081712 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
BRIZ2_ARATH | function | RING-type ubiquitin E3 ligase that binds ubiquitin and is required for seed germination and post-germination growth. |
BRIZ2_ARATH | pathway | Protein modification; protein ubiquitination. |
Function
Gene Ontology
cellular component | |
---|---|
ubiquitin ligase complex | ECO |
molecular function | |
ubiquitin binding | ECO |
zinc ion binding | ECO |
ubiquitin-protein transferase activity | ECO |
protein heterodimerization activity | ECO |
biological process | |
protein ubiquitination | ECO |
regulation of seed germination | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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