help  | faq  | software  | BAR
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide

Oops!

Error: 403
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : BRIZ2 A. thaliana

DB identifier  ? AT2G26000 Secondary Identifier  ? locus:2057469
Name  ? BRAP2 RING ZnF UBP domain-containing protein 2 Brief Description  zinc finger (C3HC4-type RING finger) family protein
TAIR Computational Description  zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)
TAIR Curator Summary  Encodes a RING domain containing protein BRIZ2. BRIZ1 (At2g42160) and BRIZ2 (At2g26000) proteins form a heteromeric E3 ligase complex required for seed germination and post-germination growth.
TAIR Short Description  zinc finger (C3HC4-type RING finger) family protein
TAIR Aliases  BRIZ2

0 Gene Rifs

1 Organism

5 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4227  
Location: Chr2:11081156-11085382

Gene models - BRIZ2 AT2G26000

? Gene models

Transcripts: 3  Exons: 37  Introns: 34 

Overlapping Features

? Genome features that overlap coordinates of this Gene

20 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
BRIZ2_ARATH function RING-type ubiquitin E3 ligase that binds ubiquitin and is required for seed germination and post-germination growth.
BRIZ2_ARATH pathway Protein modification; protein ubiquitination.

2 Proteins

Function

Gene Ontology

cellular component
ubiquitin ligase complex  ? ECO  
molecular function
ubiquitin binding  ? ECO  
zinc ion binding  ? ECO  
ubiquitin-protein transferase activity  ? ECO  
protein heterodimerization activity  ? ECO  
biological process
protein ubiquitination  ? ECO  
regulation of seed germination  ? ECO  

Interactions

Interaction Network

Error loading results. Please clear your cache and try again.
Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets