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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G25950:CDS:1 | 84 | Chr2: 11068735-11068818 | Arabidopsis thaliana |
AT2G25950:CDS:2 | 81 | Chr2: 11069107-11069187 | Arabidopsis thaliana |
AT2G25950:CDS:3 | 50 | Chr2: 11069357-11069406 | Arabidopsis thaliana |
AT2G25950:CDS:4 | 78 | Chr2: 11069593-11069670 | Arabidopsis thaliana |
AT2G25950:CDS:5 | 58 | Chr2: 11069781-11069838 | Arabidopsis thaliana |
AT2G25950:CDS:6 | 50 | Chr2: 11069925-11069974 | Arabidopsis thaliana |
AT2G25950:CDS:7 | 109 | Chr2: 11070152-11070260 | Arabidopsis thaliana |
AT2G25950:CDS:9 | 66 | Chr2: 11070341-11070406 | Arabidopsis thaliana |
AT2G25950:CDS:1.1 | 84 | Chr2: 11068735-11068818 | Arabidopsis thaliana |
AT2G25950:CDS:2.1 | 81 | Chr2: 11069107-11069187 | Arabidopsis thaliana |
AT2G25950:CDS:3.1 | 50 | Chr2: 11069357-11069406 | Arabidopsis thaliana |
AT2G25950:CDS:4.1 | 78 | Chr2: 11069593-11069670 | Arabidopsis thaliana |
AT2G25950:CDS:5.1 | 58 | Chr2: 11069781-11069838 | Arabidopsis thaliana |
AT2G25950:CDS:6.1 | 50 | Chr2: 11069925-11069974 | Arabidopsis thaliana |
AT2G25950:CDS:7.1 | 109 | Chr2: 11070152-11070260 | Arabidopsis thaliana |
AT2G25950:CDS:8 | 62 | Chr2: 11070341-11070402 | Arabidopsis thaliana |
AT2G25950:CDS:10 | 43 | Chr2: 11070482-11070524 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G25950:exon:1 | 258 | Chr2: 11068561-11068818 | Arabidopsis thaliana |
AT2G25950:exon:10 | 321 | Chr2: 11070341-11070661 | Arabidopsis thaliana |
AT2G25950:exon:2 | 239 | Chr2: 11068580-11068818 | Arabidopsis thaliana |
AT2G25950:exon:3 | 81 | Chr2: 11069107-11069187 | Arabidopsis thaliana |
AT2G25950:exon:4 | 50 | Chr2: 11069357-11069406 | Arabidopsis thaliana |
AT2G25950:exon:5 | 78 | Chr2: 11069593-11069670 | Arabidopsis thaliana |
AT2G25950:exon:6 | 58 | Chr2: 11069781-11069838 | Arabidopsis thaliana |
AT2G25950:exon:7 | 50 | Chr2: 11069925-11069974 | Arabidopsis thaliana |
AT2G25950:exon:8 | 109 | Chr2: 11070152-11070260 | Arabidopsis thaliana |
AT2G25950:exon:9 | 62 | Chr2: 11070341-11070402 | Arabidopsis thaliana |
AT2G25950:exon:11 | 180 | Chr2: 11070482-11070661 | Arabidopsis thaliana |
AT2G25964:exon:1 | 649 | Chr2: 11070639-11071287 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G25950:five_prime_UTR:1 | 174 | Chr2: 11068561-11068734 | Arabidopsis thaliana |
AT2G25950:five_prime_UTR:2 | 155 | Chr2: 11068580-11068734 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G25964 | locus:4515102909 | AT2G25964 | 649 | Chr2: 11070639-11071287 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G25950.2 | 1005 | Chr2: 11068561-11070661 |
AT2G25950.1 | 907 | Chr2: 11068580-11070661 |
AT2G25964.1 | 649 | Chr2: 11070639-11071287 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G25950:three_prime_UTR:1 | 255 | Chr2: 11070407-11070661 | Arabidopsis thaliana |
AT2G25950:three_prime_UTR:2 | 137 | Chr2: 11070525-11070661 | Arabidopsis thaliana |
AT2G25964:three_prime_UTR:1 | 496 | Chr2: 11070639-11071134 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8AXX7_ARATH A0A178VUE6_ARATH | similarity | Belongs to the PITHD1 family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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