External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 20, Exons: 12, Five Prime UTRs: 2, mRNAs: 3, Three Prime UTRs: 3, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G25470:CDS:1 | 400 | Chr2: 10838366-10838765 | Arabidopsis thaliana |
AT2G25470:CDS:3 | 156 | Chr2: 10838861-10839016 | Arabidopsis thaliana |
AT2G25470:CDS:4 | 69 | Chr2: 10839107-10839175 | Arabidopsis thaliana |
AT2G25470:CDS:5 | 75 | Chr2: 10839330-10839404 | Arabidopsis thaliana |
AT2G25470:CDS:6 | 75 | Chr2: 10839528-10839602 | Arabidopsis thaliana |
AT2G25470:CDS:8 | 1543 | Chr2: 10839720-10841262 | Arabidopsis thaliana |
AT2G25470:CDS:11 | 127 | Chr2: 10841495-10841621 | Arabidopsis thaliana |
AT2G25470:CDS:1.1 | 400 | Chr2: 10838366-10838765 | Arabidopsis thaliana |
AT2G25470:CDS:3.1 | 156 | Chr2: 10838861-10839016 | Arabidopsis thaliana |
AT2G25470:CDS:4.1 | 69 | Chr2: 10839107-10839175 | Arabidopsis thaliana |
AT2G25470:CDS:5.1 | 75 | Chr2: 10839330-10839404 | Arabidopsis thaliana |
AT2G25470:CDS:6.1 | 75 | Chr2: 10839528-10839602 | Arabidopsis thaliana |
AT2G25470:CDS:9 | 2162 | Chr2: 10839720-10841881 | Arabidopsis thaliana |
AT2G25470:CDS:2 | 346 | Chr2: 10838420-10838765 | Arabidopsis thaliana |
AT2G25470:CDS:3.2 | 156 | Chr2: 10838861-10839016 | Arabidopsis thaliana |
AT2G25470:CDS:4.2 | 69 | Chr2: 10839107-10839175 | Arabidopsis thaliana |
AT2G25470:CDS:5.2 | 75 | Chr2: 10839330-10839404 | Arabidopsis thaliana |
AT2G25470:CDS:6.2 | 75 | Chr2: 10839528-10839602 | Arabidopsis thaliana |
AT2G25470:CDS:7 | 247 | Chr2: 10839720-10839966 | Arabidopsis thaliana |
AT2G25470:CDS:10 | 1840 | Chr2: 10840042-10841881 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G25470:exon:1 | 472 | Chr2: 10838294-10838765 | Arabidopsis thaliana |
AT2G25470:exon:9 | 1543 | Chr2: 10839720-10841262 | Arabidopsis thaliana |
AT2G25470:exon:12 | 490 | Chr2: 10841495-10841984 | Arabidopsis thaliana |
AT2G25470:exon:2 | 459 | Chr2: 10838307-10838765 | Arabidopsis thaliana |
AT2G25470:exon:10 | 2297 | Chr2: 10839720-10842016 | Arabidopsis thaliana |
AT2G25470:exon:3 | 346 | Chr2: 10838420-10838765 | Arabidopsis thaliana |
AT2G25470:exon:4 | 156 | Chr2: 10838861-10839016 | Arabidopsis thaliana |
AT2G25470:exon:5 | 69 | Chr2: 10839107-10839175 | Arabidopsis thaliana |
AT2G25470:exon:6 | 75 | Chr2: 10839330-10839404 | Arabidopsis thaliana |
AT2G25470:exon:7 | 75 | Chr2: 10839528-10839602 | Arabidopsis thaliana |
AT2G25470:exon:8 | 247 | Chr2: 10839720-10839966 | Arabidopsis thaliana |
AT2G25470:exon:11 | 1914 | Chr2: 10840042-10841955 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G25470:five_prime_UTR:1 | 72 | Chr2: 10838294-10838365 | Arabidopsis thaliana |
AT2G25470:five_prime_UTR:2 | 59 | Chr2: 10838307-10838365 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G25470.2 | 2880 | Chr2: 10838294-10841984 |
AT2G25470.3 | 3131 | Chr2: 10838307-10842016 |
AT2G25470.1 | 2882 | Chr2: 10838420-10841955 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G25470:three_prime_UTR:1 | 363 | Chr2: 10841622-10841984 | Arabidopsis thaliana |
AT2G25470:three_prime_UTR:3 | 135 | Chr2: 10841882-10842016 | Arabidopsis thaliana |
AT2G25470:three_prime_UTR:2 | 74 | Chr2: 10841882-10841955 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE46570 | 124 | Chr2: 10842007-10842130 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE46570:transposon_fragment:1 | 124 | Chr2: 10842007-10842130 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
F4IRP9_ARATH A0A1P8B226_ARATH RLP21_ARATH | similarity | Belongs to the RLP family. |
Function
Gene Ontology
cellular component | |
---|---|
plasma membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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