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Gene : SDF2 A. thaliana

DB identifier  ? AT2G25110 Secondary Identifier  ? locus:2040199
Name  ? stromal cell-derived factor 2-like protein precursor Brief Description  stromal cell-derived factor 2-like protein precursor
TAIR Computational Description  stromal cell-derived factor 2-like protein precursor;(source:Araport11)
TAIR Curator Summary  Encodes an endoplasmic reticulum protein SDF2 (stromal-derived factor-2). Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.
TAIR Short Description  stromal cell-derived factor 2-like protein precursor
TAIR Aliases  AtSDF2, ATSDL, SDF2

2 Gene Rifs

1 Organism

20 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2230  
Location: Chr2:10684118-10686347

Gene models - SDF2 AT2G25110

? Gene models

Transcripts: 1  Exons: 6  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SDF2_ARATH function Involved in the endoplasmic reticulum (ER) protein quality control and unfolded protein response. May be involved in the quality control of glycoproteins. Forms a complex in the ER with ERDJ3B and MED37A/BIP1 which is required for the proper accumulation and function of the surface-exposed leucine-rich repeat receptor kinases EFR involved in pathogen-associated molecular pattern (PAMP) triggered immunity.

1 Proteins

Function

Gene Ontology

cellular component
endoplasmic reticulum  ? ECO  
vacuole  ? ECO  
molecular function
No terms in this category.
biological process
pattern recognition receptor signaling pathway  ? ECO  
defense response to bacterium  ? ECO  
defense response to fungus  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets