External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 51, Exons: 20, Five Prime UTRs: 3, mRNAs: 4, Three Prime UTRs: 4, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G22970:CDS:1 | 125 | Chr2: 9774875-9774999 | Arabidopsis thaliana |
AT2G22970:CDS:2 | 146 | Chr2: 9775074-9775219 | Arabidopsis thaliana |
AT2G22970:CDS:3 | 77 | Chr2: 9775320-9775396 | Arabidopsis thaliana |
AT2G22970:CDS:4 | 123 | Chr2: 9775477-9775599 | Arabidopsis thaliana |
AT2G22970:CDS:5 | 103 | Chr2: 9776004-9776106 | Arabidopsis thaliana |
AT2G22970:CDS:6 | 38 | Chr2: 9776175-9776212 | Arabidopsis thaliana |
AT2G22970:CDS:7 | 99 | Chr2: 9776418-9776516 | Arabidopsis thaliana |
AT2G22970:CDS:8 | 87 | Chr2: 9776618-9776704 | Arabidopsis thaliana |
AT2G22970:CDS:9 | 69 | Chr2: 9776797-9776865 | Arabidopsis thaliana |
AT2G22970:CDS:10 | 72 | Chr2: 9777051-9777122 | Arabidopsis thaliana |
AT2G22970:CDS:12 | 122 | Chr2: 9777203-9777324 | Arabidopsis thaliana |
AT2G22970:CDS:13 | 114 | Chr2: 9777785-9777898 | Arabidopsis thaliana |
AT2G22970:CDS:14 | 46 | Chr2: 9778011-9778056 | Arabidopsis thaliana |
AT2G22970:CDS:17 | 81 | Chr2: 9778144-9778224 | Arabidopsis thaliana |
AT2G22970:CDS:1.1 | 125 | Chr2: 9774875-9774999 | Arabidopsis thaliana |
AT2G22970:CDS:2.1 | 146 | Chr2: 9775074-9775219 | Arabidopsis thaliana |
AT2G22970:CDS:3.1 | 77 | Chr2: 9775320-9775396 | Arabidopsis thaliana |
AT2G22970:CDS:4.1 | 123 | Chr2: 9775477-9775599 | Arabidopsis thaliana |
AT2G22970:CDS:5.1 | 103 | Chr2: 9776004-9776106 | Arabidopsis thaliana |
AT2G22970:CDS:6.1 | 38 | Chr2: 9776175-9776212 | Arabidopsis thaliana |
AT2G22970:CDS:7.1 | 99 | Chr2: 9776418-9776516 | Arabidopsis thaliana |
AT2G22970:CDS:8.1 | 87 | Chr2: 9776618-9776704 | Arabidopsis thaliana |
AT2G22970:CDS:9.1 | 69 | Chr2: 9776797-9776865 | Arabidopsis thaliana |
AT2G22970:CDS:10.1 | 72 | Chr2: 9777051-9777122 | Arabidopsis thaliana |
AT2G22970:CDS:12.1 | 122 | Chr2: 9777203-9777324 | Arabidopsis thaliana |
AT2G22970:CDS:13.1 | 114 | Chr2: 9777785-9777898 | Arabidopsis thaliana |
AT2G22970:CDS:16 | 70 | Chr2: 9778011-9778080 | Arabidopsis thaliana |
AT2G22970:CDS:1.2 | 125 | Chr2: 9774875-9774999 | Arabidopsis thaliana |
AT2G22970:CDS:2.2 | 146 | Chr2: 9775074-9775219 | Arabidopsis thaliana |
AT2G22970:CDS:3.2 | 77 | Chr2: 9775320-9775396 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G22970:exon:1 | 251 | Chr2: 9774749-9774999 | Arabidopsis thaliana |
AT2G22970:exon:16 | 46 | Chr2: 9778011-9778056 | Arabidopsis thaliana |
AT2G22970:exon:19 | 418 | Chr2: 9778144-9778561 | Arabidopsis thaliana |
AT2G22970:exon:2 | 152 | Chr2: 9774848-9774999 | Arabidopsis thaliana |
AT2G22970:exon:18 | 551 | Chr2: 9778011-9778561 | Arabidopsis thaliana |
AT2G22970:exon:13 | 100 | Chr2: 9777051-9777150 | Arabidopsis thaliana |
AT2G22970:exon:3 | 147 | Chr2: 9774853-9774999 | Arabidopsis thaliana |
AT2G22970:exon:4 | 146 | Chr2: 9775074-9775219 | Arabidopsis thaliana |
AT2G22970:exon:5 | 77 | Chr2: 9775320-9775396 | Arabidopsis thaliana |
AT2G22970:exon:6 | 123 | Chr2: 9775477-9775599 | Arabidopsis thaliana |
AT2G22970:exon:7 | 103 | Chr2: 9776004-9776106 | Arabidopsis thaliana |
AT2G22970:exon:8 | 38 | Chr2: 9776175-9776212 | Arabidopsis thaliana |
AT2G22970:exon:9 | 99 | Chr2: 9776418-9776516 | Arabidopsis thaliana |
AT2G22970:exon:10 | 87 | Chr2: 9776618-9776704 | Arabidopsis thaliana |
AT2G22970:exon:11 | 69 | Chr2: 9776797-9776865 | Arabidopsis thaliana |
AT2G22970:exon:12 | 72 | Chr2: 9777051-9777122 | Arabidopsis thaliana |
AT2G22970:exon:14 | 122 | Chr2: 9777203-9777324 | Arabidopsis thaliana |
AT2G22970:exon:15 | 114 | Chr2: 9777785-9777898 | Arabidopsis thaliana |
AT2G22970:exon:17 | 50 | Chr2: 9778011-9778060 | Arabidopsis thaliana |
AT2G22970:exon:20 | 364 | Chr2: 9778149-9778512 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G22970:five_prime_UTR:1 | 126 | Chr2: 9774749-9774874 | Arabidopsis thaliana |
AT2G22970:five_prime_UTR:2 | 27 | Chr2: 9774848-9774874 | Arabidopsis thaliana |
AT2G22970:five_prime_UTR:3 | 22 | Chr2: 9774853-9774874 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G22970.1 | 1765 | Chr2: 9774749-9778561 |
AT2G22970.4 | 1753 | Chr2: 9774848-9778561 |
AT2G22970.2 | 989 | Chr2: 9774853-9777150 |
AT2G22970.3 | 1611 | Chr2: 9774853-9778512 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G22970:three_prime_UTR:3 | 337 | Chr2: 9778225-9778561 | Arabidopsis thaliana |
AT2G22970:three_prime_UTR:2 | 481 | Chr2: 9778081-9778561 | Arabidopsis thaliana |
AT2G22970:three_prime_UTR:1 | 4 | Chr2: 9777147-9777150 | Arabidopsis thaliana |
AT2G22970:three_prime_UTR:4 | 257 | Chr2: 9778256-9778512 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE41765 | 277 | Chr2: 9778366-9778642 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE41765:transposon_fragment:1 | 277 | Chr2: 9778366-9778642 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
SCP11_ARATH-2 SCP11_ARATH | function | Probable carboxypeptidase. |
A0A1P8AXC6_ARATH SCP11_ARATH-2 A8MQP0_ARATH SCP11_ARATH | similarity | Belongs to the peptidase S10 family. |
SCP11_ARATH-2 SCP11_ARATH | tissue specificity | Ubiquitous. |
Function
Gene Ontology
cellular component | |
---|---|
extracellular region | ECO |
molecular function | |
acyltransferase activity, transferring groups other than amino-acyl groups | ECO |
serine-type carboxypeptidase activity | ECO |
biological process | |
proteolysis | ECO |
secondary metabolic process | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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