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Gene : AT2G22400 A. thaliana

DB identifier  ? AT2G22400 Secondary Identifier  ? locus:2041213
Brief Description  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
TAIR Computational Description  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)
TAIR Curator Summary  TRM4B is a cytosine-5--methyltransferase. Mutants have decreased methyl cytosine and defects in root development.
TAIR Short Description  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
TAIR Aliases  AtTRM4b, TRM4B

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4237  
Location: Chr2:9504659-9508895 reverse strand

Gene models - AT2G22400 AT2G22400

? Gene models

Transcripts: 1  Exons: 15  Introns: 14 

Overlapping Features

? Genome features that overlap coordinates of this Gene

16 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
Q8L601_ARATH similarity Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
tRNA (cytidine-5-)-methyltransferase activity  ? ECO  
tRNA binding  ? ECO  
biological process
tRNA methylation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets