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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G20100:CDS:1 | 299 | Chr2: 8678185-8678483 | Arabidopsis thaliana |
AT2G20100:CDS:2 | 274 | Chr2: 8678730-8679003 | Arabidopsis thaliana |
AT2G20100:CDS:3 | 84 | Chr2: 8679132-8679215 | Arabidopsis thaliana |
AT2G20100:CDS:4 | 66 | Chr2: 8679967-8680032 | Arabidopsis thaliana |
AT2G20100:CDS:5 | 66 | Chr2: 8680147-8680212 | Arabidopsis thaliana |
AT2G20100:CDS:6 | 57 | Chr2: 8680548-8680604 | Arabidopsis thaliana |
AT2G20100:CDS:8 | 108 | Chr2: 8680809-8680916 | Arabidopsis thaliana |
AT2G20100:CDS:1.1 | 299 | Chr2: 8678185-8678483 | Arabidopsis thaliana |
AT2G20100:CDS:2.1 | 274 | Chr2: 8678730-8679003 | Arabidopsis thaliana |
AT2G20100:CDS:3.1 | 84 | Chr2: 8679132-8679215 | Arabidopsis thaliana |
AT2G20100:CDS:4.1 | 66 | Chr2: 8679967-8680032 | Arabidopsis thaliana |
AT2G20100:CDS:5.1 | 66 | Chr2: 8680147-8680212 | Arabidopsis thaliana |
AT2G20100:CDS:6.1 | 57 | Chr2: 8680548-8680604 | Arabidopsis thaliana |
AT2G20100:CDS:7 | 45 | Chr2: 8680809-8680853 | Arabidopsis thaliana |
AT2G20100:CDS:9 | 336 | Chr2: 8681474-8681809 | Arabidopsis thaliana |
AT2G20100:CDS:1.2 | 299 | Chr2: 8678185-8678483 | Arabidopsis thaliana |
AT2G20100:CDS:2.2 | 274 | Chr2: 8678730-8679003 | Arabidopsis thaliana |
AT2G20100:CDS:3.2 | 84 | Chr2: 8679132-8679215 | Arabidopsis thaliana |
AT2G20100:CDS:4.2 | 66 | Chr2: 8679967-8680032 | Arabidopsis thaliana |
AT2G20100:CDS:5.2 | 66 | Chr2: 8680147-8680212 | Arabidopsis thaliana |
AT2G20100:CDS:6.2 | 57 | Chr2: 8680548-8680604 | Arabidopsis thaliana |
AT2G20100:CDS:7.1 | 45 | Chr2: 8680809-8680853 | Arabidopsis thaliana |
AT2G20100:CDS:10 | 198 | Chr2: 8681612-8681809 | Arabidopsis thaliana |
AT2G20100:CDS:1.3 | 299 | Chr2: 8678185-8678483 | Arabidopsis thaliana |
AT2G20100:CDS:2.3 | 274 | Chr2: 8678730-8679003 | Arabidopsis thaliana |
AT2G20100:CDS:3.3 | 84 | Chr2: 8679132-8679215 | Arabidopsis thaliana |
AT2G20100:CDS:4.3 | 66 | Chr2: 8679967-8680032 | Arabidopsis thaliana |
AT2G20100:CDS:5.3 | 66 | Chr2: 8680147-8680212 | Arabidopsis thaliana |
AT2G20100:CDS:6.3 | 57 | Chr2: 8680548-8680604 | Arabidopsis thaliana |
AT2G20100:CDS:8.1 | 108 | Chr2: 8680809-8680916 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G20100:exon:10 | 1367 | Chr2: 8680809-8682175 | Arabidopsis thaliana |
AT2G20100:exon:11 | 702 | Chr2: 8681474-8682175 | Arabidopsis thaliana |
AT2G20100:exon:1 | 524 | Chr2: 8677960-8678483 | Arabidopsis thaliana |
AT2G20100:exon:8 | 45 | Chr2: 8680809-8680853 | Arabidopsis thaliana |
AT2G20100:exon:13 | 564 | Chr2: 8681612-8682175 | Arabidopsis thaliana |
AT2G20100:exon:2 | 434 | Chr2: 8678050-8678483 | Arabidopsis thaliana |
AT2G20100:exon:3 | 274 | Chr2: 8678730-8679003 | Arabidopsis thaliana |
AT2G20100:exon:4 | 84 | Chr2: 8679132-8679215 | Arabidopsis thaliana |
AT2G20100:exon:5 | 66 | Chr2: 8679967-8680032 | Arabidopsis thaliana |
AT2G20100:exon:6 | 66 | Chr2: 8680147-8680212 | Arabidopsis thaliana |
AT2G20100:exon:7 | 57 | Chr2: 8680548-8680604 | Arabidopsis thaliana |
AT2G20100:exon:9 | 701 | Chr2: 8680809-8681509 | Arabidopsis thaliana |
AT2G20100:exon:12 | 501 | Chr2: 8681612-8682112 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G20100:five_prime_UTR:1 | 225 | Chr2: 8677960-8678184 | Arabidopsis thaliana |
AT2G20100:five_prime_UTR:2 | 135 | Chr2: 8678050-8678184 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G20100.2 | 2438 | Chr2: 8677960-8682175 |
AT2G20100.3 | 1818 | Chr2: 8677960-8682175 |
AT2G20100.1 | 1680 | Chr2: 8677960-8682175 |
AT2G20100.4 | 2183 | Chr2: 8678050-8682112 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G20100:three_prime_UTR:2 | 1259 | Chr2: 8680917-8682175 | Arabidopsis thaliana |
AT2G20100:three_prime_UTR:4 | 366 | Chr2: 8681810-8682175 | Arabidopsis thaliana |
AT2G20100:three_prime_UTR:1 | 593 | Chr2: 8680917-8681509 | Arabidopsis thaliana |
AT2G20100:three_prime_UTR:3 | 501 | Chr2: 8681612-8682112 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
BH133_ARATH BH133_ARATH-2 | similarity | Belongs to the bHLH protein family. |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
DNA-binding transcription factor activity | ECO |
DNA binding | ECO |
protein dimerization activity | ECO |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...