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Gene : emb2444 A. thaliana

DB identifier  ? AT2G18510 Secondary Identifier  ? locus:2046298
Name  ? embryo defective 2444 Brief Description  RNA-binding (RRM/RBD/RNP motifs) family protein
TAIR Computational Description  RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)
TAIR Curator Summary  Essential gene (embryo lethal) that is similar to component of splicosome. Regulates embryonic pattern formation through Pol II-Mediated transcription of WOX2 an PIN7 (DOI:10.1016/j.isci.2019.09.004). JANUS positively regulates PLT1 expression in the root meristem by recruiting RNA polymerase II (Pol II) to PLT1 and by interacting with PLT1. Nuclear accumulation of JANUS in root meristem depends on IMB4. (DOI:10.1105/tpc.20.00108 )
TAIR Short Description  RNA-binding (RRM/RBD/RNP motifs) family protein
TAIR Aliases  EMB2444, JANUS

0 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2660  
Location: Chr2:8030960-8033619 reverse strand

Gene models - emb2444 AT2G18510

? Gene models

Transcripts: 1  Exons: 9  Introns: 8 

Overlapping Features

? Genome features that overlap coordinates of this Gene

10 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
Q9ZU66_ARATH similarity Belongs to the SF3B4 family.

1 Proteins

Function

Gene Ontology

cellular component
nucleolus  ? ECO  
nucleus  ? ECO  
molecular function
RNA polymerase binding  ? ECO  
mRNA binding  ? ECO  
biological process
regulation of transcription by RNA polymerase II  ? ECO  
regulation of meristem growth  ? ECO  
embryo development ending in seed dormancy  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets