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Gene : AT2G18410 A. thaliana

DB identifier  ? AT2G18410 Secondary Identifier  ? locus:2062190
Brief Description  elongator complex protein
TAIR Computational Description  elongator complex protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  NULL
TAIR Aliases  ELP5

0 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2157  
Location: Chr2:7990618-7992774

Gene models - AT2G18410 AT2G18410

? Gene models

Transcripts: 2  Exons: 17  Introns: 15 

Overlapping Features

? Genome features that overlap coordinates of this Gene

13 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ELP5_ARATH ELP5_ARATH-2 function Component of the elongator complex which is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl uridine) (By similarity). The elongator complex catalyzes the formation of carboxymethyluridine in the wobble base at position 34 in tRNAs (By similarity).
ELP5_ARATH ELP5_ARATH-2 pathway tRNA modification; 5-methoxycarbonylmethyl-2-thiouridine-tRNA biosynthesis.
ELP5_ARATH ELP5_ARATH-2 similarity Belongs to the ELP5 family.

2 Proteins

Function

Gene Ontology

cellular component
elongator holoenzyme complex  ? ECO  
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
No terms in this category.
biological process
tRNA wobble uridine modification  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets