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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G18180:CDS:16 | 12 | Chr2: 7911005-7911016 | Arabidopsis thaliana |
AT2G18180:CDS:14 | 75 | Chr2: 7911105-7911179 | Arabidopsis thaliana |
AT2G18180:CDS:13 | 401 | Chr2: 7911271-7911671 | Arabidopsis thaliana |
AT2G18180:CDS:12 | 61 | Chr2: 7911768-7911828 | Arabidopsis thaliana |
AT2G18180:CDS:11 | 141 | Chr2: 7911894-7912034 | Arabidopsis thaliana |
AT2G18180:CDS:10 | 100 | Chr2: 7912143-7912242 | Arabidopsis thaliana |
AT2G18180:CDS:9 | 50 | Chr2: 7912328-7912377 | Arabidopsis thaliana |
AT2G18180:CDS:8 | 102 | Chr2: 7912459-7912560 | Arabidopsis thaliana |
AT2G18180:CDS:7 | 78 | Chr2: 7912655-7912732 | Arabidopsis thaliana |
AT2G18180:CDS:6 | 267 | Chr2: 7912812-7913078 | Arabidopsis thaliana |
AT2G18180:CDS:4 | 100 | Chr2: 7913173-7913272 | Arabidopsis thaliana |
AT2G18180:CDS:2 | 235 | Chr2: 7913346-7913580 | Arabidopsis thaliana |
AT2G18180:CDS:1 | 16 | Chr2: 7913680-7913695 | Arabidopsis thaliana |
AT2G18180:CDS:15 | 126 | Chr2: 7911054-7911179 | Arabidopsis thaliana |
AT2G18180:CDS:13.1 | 401 | Chr2: 7911271-7911671 | Arabidopsis thaliana |
AT2G18180:CDS:12.1 | 61 | Chr2: 7911768-7911828 | Arabidopsis thaliana |
AT2G18180:CDS:11.1 | 141 | Chr2: 7911894-7912034 | Arabidopsis thaliana |
AT2G18180:CDS:10.1 | 100 | Chr2: 7912143-7912242 | Arabidopsis thaliana |
AT2G18180:CDS:9.1 | 50 | Chr2: 7912328-7912377 | Arabidopsis thaliana |
AT2G18180:CDS:8.1 | 102 | Chr2: 7912459-7912560 | Arabidopsis thaliana |
AT2G18180:CDS:7.1 | 78 | Chr2: 7912655-7912732 | Arabidopsis thaliana |
AT2G18180:CDS:6.1 | 267 | Chr2: 7912812-7913078 | Arabidopsis thaliana |
AT2G18180:CDS:3 | 138 | Chr2: 7913173-7913310 | Arabidopsis thaliana |
AT2G18180:CDS:15.1 | 126 | Chr2: 7911054-7911179 | Arabidopsis thaliana |
AT2G18180:CDS:13.2 | 401 | Chr2: 7911271-7911671 | Arabidopsis thaliana |
AT2G18180:CDS:12.2 | 61 | Chr2: 7911768-7911828 | Arabidopsis thaliana |
AT2G18180:CDS:11.2 | 141 | Chr2: 7911894-7912034 | Arabidopsis thaliana |
AT2G18180:CDS:10.2 | 100 | Chr2: 7912143-7912242 | Arabidopsis thaliana |
AT2G18180:CDS:9.2 | 50 | Chr2: 7912328-7912377 | Arabidopsis thaliana |
AT2G18180:CDS:8.2 | 102 | Chr2: 7912459-7912560 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G18180:exon:21 | 314 | Chr2: 7910703-7911016 | Arabidopsis thaliana |
AT2G18180:exon:1 | 182 | Chr2: 7913680-7913861 | Arabidopsis thaliana |
AT2G18180:exon:20 | 432 | Chr2: 7910748-7911179 | Arabidopsis thaliana |
AT2G18180:exon:6 | 235 | Chr2: 7913346-7913580 | Arabidopsis thaliana |
AT2G18180:exon:3 | 176 | Chr2: 7913680-7913855 | Arabidopsis thaliana |
AT2G18180:exon:19 | 252 | Chr2: 7910765-7911016 | Arabidopsis thaliana |
AT2G18180:exon:7 | 408 | Chr2: 7913173-7913580 | Arabidopsis thaliana |
AT2G18180:exon:2 | 178 | Chr2: 7913680-7913857 | Arabidopsis thaliana |
AT2G18180:exon:18 | 174 | Chr2: 7910843-7911016 | Arabidopsis thaliana |
AT2G18180:exon:17 | 75 | Chr2: 7911105-7911179 | Arabidopsis thaliana |
AT2G18180:exon:16 | 401 | Chr2: 7911271-7911671 | Arabidopsis thaliana |
AT2G18180:exon:15 | 61 | Chr2: 7911768-7911828 | Arabidopsis thaliana |
AT2G18180:exon:14 | 141 | Chr2: 7911894-7912034 | Arabidopsis thaliana |
AT2G18180:exon:13 | 100 | Chr2: 7912143-7912242 | Arabidopsis thaliana |
AT2G18180:exon:12 | 50 | Chr2: 7912328-7912377 | Arabidopsis thaliana |
AT2G18180:exon:11 | 102 | Chr2: 7912459-7912560 | Arabidopsis thaliana |
AT2G18180:exon:10 | 78 | Chr2: 7912655-7912732 | Arabidopsis thaliana |
AT2G18180:exon:9 | 267 | Chr2: 7912812-7913078 | Arabidopsis thaliana |
AT2G18180:exon:8 | 100 | Chr2: 7913173-7913272 | Arabidopsis thaliana |
AT2G18180:exon:5 | 155 | Chr2: 7913426-7913580 | Arabidopsis thaliana |
AT2G18180:exon:4 | 151 | Chr2: 7913680-7913830 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G18180:five_prime_UTR:1 | 166 | Chr2: 7913696-7913861 | Arabidopsis thaliana |
AT2G18180:five_prime_UTR:4 | 176 | Chr2: 7913680-7913855 | Arabidopsis thaliana |
AT2G18180:five_prime_UTR:2 | 160 | Chr2: 7913696-7913855 | Arabidopsis thaliana |
AT2G18180:five_prime_UTR:7 | 270 | Chr2: 7913311-7913580 | Arabidopsis thaliana |
AT2G18180:five_prime_UTR:3 | 178 | Chr2: 7913680-7913857 | Arabidopsis thaliana |
AT2G18180:five_prime_UTR:8 | 43 | Chr2: 7913230-7913272 | Arabidopsis thaliana |
AT2G18180:five_prime_UTR:6 | 155 | Chr2: 7913426-7913580 | Arabidopsis thaliana |
AT2G18180:five_prime_UTR:5 | 151 | Chr2: 7913680-7913830 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G18180.2 | 2106 | Chr2: 7910703-7913861 |
AT2G18180.3 | 2216 | Chr2: 7910748-7913855 |
AT2G18180.1 | 2143 | Chr2: 7910748-7913855 |
AT2G18180.4 | 2113 | Chr2: 7910765-7913857 |
AT2G18180.5 | 1855 | Chr2: 7910843-7913830 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G18180:three_prime_UTR:4 | 302 | Chr2: 7910703-7911004 | Arabidopsis thaliana |
AT2G18180:three_prime_UTR:3 | 306 | Chr2: 7910748-7911053 | Arabidopsis thaliana |
AT2G18180:three_prime_UTR:2 | 240 | Chr2: 7910765-7911004 | Arabidopsis thaliana |
AT2G18180:three_prime_UTR:1 | 162 | Chr2: 7910843-7911004 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
SFH10_ARATH | function | Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity). |
SFH10_ARATH A0A1P8AY47_ARATH A0A1P8AYA7_ARATH A0A1P8AY48_ARATH A0A1P8AYA0_ARATH | similarity | Belongs to the SFH family. |
Function
Gene Ontology
cellular component | |
---|---|
plasma membrane | ECO |
Golgi membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
protein transport | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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