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Gene : VND1 A. thaliana

DB identifier  ? AT2G18060 Secondary Identifier  ? locus:2060979
Name  ? vascular related NAC-domain protein 1 Brief Description  vascular related NAC-domain protein 1
TAIR Computational Description  vascular related NAC-domain protein 1;(source:Araport11)
TAIR Curator Summary  Encodes a NAC-domain transcription factor that is expressed in developing vessels and protoxylem. Along with other members of this family, VND1 appears to regulate the development of genes required for secondary cell wall biosynthesis.
TAIR Short Description  vascular related NAC-domain protein 1
TAIR Aliases  ANAC037, VND1

2 Gene Rifs

1 Organism

20 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3640  
Location: Chr2:7847967-7851606 reverse strand

Gene models - VND1 AT2G18060

? Gene models

Transcripts: 3  Exons: 10  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
NAC37_ARATH developmental stage Up-regulated during xylem vessel element formation. Expressed preferentially in procambial cells adjacent to root meristem.
NAC37_ARATH function Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:25148240).
NAC37_ARATH similarity Belongs to the plant vascular related NAC-domain protein family.
NAC37_ARATH tissue specificity Expressed in root metaxylem pole and in shoot pre-procambium and procambium (PubMed:18445131). Present in root developing xylems (PubMed:16103214). Specifically expressed in vessels but not in interfascicular fibers in stems (PubMed:25148240).

2 Proteins

Function

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets