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Gene : P4H5 A. thaliana

DB identifier  ? AT2G17720 Secondary Identifier  ? locus:2827906
Name  ? prolyl 4-hydroxylase 5 Brief Description  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR Computational Description  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)
TAIR Curator Summary  Encodes a prolyl 4-hydroxylase that modifies the extensin proteins in root hair cells.
TAIR Short Description  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR Aliases  P4H5

1 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2320  
Location: Chr2:7697311-7699630

Gene models - P4H5 AT2G17720

? Gene models

Transcripts: 1  Exons: 8  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
P4H5_ARATH function Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins. Possesses high affinity for leucine-rich repeat and proline-rich extensins of root cell walls that are essential for root hair development. Hydroxyprolines define the subsequent O-glycosylation sites by arabinosyltransferases which elongate the O-arabinosides on extensins.
P4H5_ARATH similarity Belongs to the P4HA family.
P4H5_ARATH subcellular location Predominantly localized in the endoplasmic reticulum.
P4H5_ARATH tissue specificity Expressed in epidermal root hair cells (trichoblasts).

1 Proteins

Function

Gene Ontology

cellular component
endoplasmic reticulum  ? ECO  
endoplasmic reticulum membrane  ? ECO  
Golgi cis cisterna  ? ECO  
Golgi membrane  ? ECO  
mitochondrion  ? ECO  
molecular function
procollagen-proline 4-dioxygenase activity  ? ECO  
iron ion binding  ? ECO  
L-ascorbic acid binding  ? ECO  
biological process
root hair cell development  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets