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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16940:CDS:20 | 48 | Chr2: 7342869-7342916 | Arabidopsis thaliana |
AT2G16940:CDS:19 | 115 | Chr2: 7343025-7343139 | Arabidopsis thaliana |
AT2G16940:CDS:18 | 89 | Chr2: 7343237-7343325 | Arabidopsis thaliana |
AT2G16940:CDS:17 | 211 | Chr2: 7343411-7343621 | Arabidopsis thaliana |
AT2G16940:CDS:16 | 65 | Chr2: 7343710-7343774 | Arabidopsis thaliana |
AT2G16940:CDS:15 | 90 | Chr2: 7344087-7344176 | Arabidopsis thaliana |
AT2G16940:CDS:14 | 75 | Chr2: 7344504-7344578 | Arabidopsis thaliana |
AT2G16940:CDS:13 | 84 | Chr2: 7344674-7344757 | Arabidopsis thaliana |
AT2G16940:CDS:12 | 232 | Chr2: 7344966-7345197 | Arabidopsis thaliana |
AT2G16940:CDS:11 | 56 | Chr2: 7345400-7345455 | Arabidopsis thaliana |
AT2G16940:CDS:9 | 57 | Chr2: 7345557-7345613 | Arabidopsis thaliana |
AT2G16940:CDS:7 | 141 | Chr2: 7345695-7345835 | Arabidopsis thaliana |
AT2G16940:CDS:20.1 | 48 | Chr2: 7342869-7342916 | Arabidopsis thaliana |
AT2G16940:CDS:19.1 | 115 | Chr2: 7343025-7343139 | Arabidopsis thaliana |
AT2G16940:CDS:18.1 | 89 | Chr2: 7343237-7343325 | Arabidopsis thaliana |
AT2G16940:CDS:17.1 | 211 | Chr2: 7343411-7343621 | Arabidopsis thaliana |
AT2G16940:CDS:16.1 | 65 | Chr2: 7343710-7343774 | Arabidopsis thaliana |
AT2G16940:CDS:15.1 | 90 | Chr2: 7344087-7344176 | Arabidopsis thaliana |
AT2G16940:CDS:14.1 | 75 | Chr2: 7344504-7344578 | Arabidopsis thaliana |
AT2G16940:CDS:13.1 | 84 | Chr2: 7344674-7344757 | Arabidopsis thaliana |
AT2G16940:CDS:12.1 | 232 | Chr2: 7344966-7345197 | Arabidopsis thaliana |
AT2G16940:CDS:11.1 | 56 | Chr2: 7345400-7345455 | Arabidopsis thaliana |
AT2G16940:CDS:9.1 | 57 | Chr2: 7345557-7345613 | Arabidopsis thaliana |
AT2G16940:CDS:8 | 82 | Chr2: 7345695-7345776 | Arabidopsis thaliana |
AT2G16940:CDS:6 | 40 | Chr2: 7345946-7345985 | Arabidopsis thaliana |
AT2G16940:CDS:4 | 70 | Chr2: 7346108-7346177 | Arabidopsis thaliana |
AT2G16940:CDS:2 | 37 | Chr2: 7346427-7346463 | Arabidopsis thaliana |
AT2G16940:CDS:1 | 482 | Chr2: 7346571-7347052 | Arabidopsis thaliana |
AT2G16940:CDS:20.2 | 48 | Chr2: 7342869-7342916 | Arabidopsis thaliana |
AT2G16940:CDS:19.2 | 115 | Chr2: 7343025-7343139 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16940:exon:11 | 207 | Chr2: 7345695-7345901 | Arabidopsis thaliana |
AT2G16940:exon:9 | 40 | Chr2: 7345946-7345985 | Arabidopsis thaliana |
AT2G16940:exon:7 | 70 | Chr2: 7346108-7346177 | Arabidopsis thaliana |
AT2G16940:exon:5 | 37 | Chr2: 7346427-7346463 | Arabidopsis thaliana |
AT2G16940:exon:14 | 84 | Chr2: 7345530-7345613 | Arabidopsis thaliana |
AT2G16940:exon:8 | 28 | Chr2: 7345968-7345995 | Arabidopsis thaliana |
AT2G16940:exon:6 | 59 | Chr2: 7346139-7346197 | Arabidopsis thaliana |
AT2G16940:exon:3 | 160 | Chr2: 7347249-7347408 | Arabidopsis thaliana |
AT2G16940:exon:10 | 483 | Chr2: 7345695-7346177 | Arabidopsis thaliana |
AT2G16940:exon:2 | 196 | Chr2: 7347249-7347444 | Arabidopsis thaliana |
AT2G16940:exon:24 | 310 | Chr2: 7342607-7342916 | Arabidopsis thaliana |
AT2G16940:exon:23 | 115 | Chr2: 7343025-7343139 | Arabidopsis thaliana |
AT2G16940:exon:22 | 89 | Chr2: 7343237-7343325 | Arabidopsis thaliana |
AT2G16940:exon:21 | 211 | Chr2: 7343411-7343621 | Arabidopsis thaliana |
AT2G16940:exon:20 | 65 | Chr2: 7343710-7343774 | Arabidopsis thaliana |
AT2G16940:exon:19 | 90 | Chr2: 7344087-7344176 | Arabidopsis thaliana |
AT2G16940:exon:18 | 75 | Chr2: 7344504-7344578 | Arabidopsis thaliana |
AT2G16940:exon:17 | 84 | Chr2: 7344674-7344757 | Arabidopsis thaliana |
AT2G16940:exon:16 | 232 | Chr2: 7344966-7345197 | Arabidopsis thaliana |
AT2G16940:exon:15 | 56 | Chr2: 7345400-7345455 | Arabidopsis thaliana |
AT2G16940:exon:13 | 57 | Chr2: 7345557-7345613 | Arabidopsis thaliana |
AT2G16940:exon:12 | 82 | Chr2: 7345695-7345776 | Arabidopsis thaliana |
AT2G16940:exon:4 | 505 | Chr2: 7346571-7347075 | Arabidopsis thaliana |
AT2G16940:exon:1 | 216 | Chr2: 7347249-7347464 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16940:five_prime_UTR:7 | 66 | Chr2: 7345836-7345901 | Arabidopsis thaliana |
AT2G16940:five_prime_UTR:3 | 160 | Chr2: 7347249-7347408 | Arabidopsis thaliana |
AT2G16940:five_prime_UTR:6 | 342 | Chr2: 7345836-7346177 | Arabidopsis thaliana |
AT2G16940:five_prime_UTR:5 | 505 | Chr2: 7346571-7347075 | Arabidopsis thaliana |
AT2G16940:five_prime_UTR:2 | 196 | Chr2: 7347249-7347444 | Arabidopsis thaliana |
AT2G16940:five_prime_UTR:4 | 23 | Chr2: 7347053-7347075 | Arabidopsis thaliana |
AT2G16940:five_prime_UTR:1 | 216 | Chr2: 7347249-7347464 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G16940.5 | 1591 | Chr2: 7342607-7345901 |
AT2G16940.2 | 2278 | Chr2: 7342607-7347408 |
AT2G16940.3 | 2245 | Chr2: 7342607-7347408 |
AT2G16940.4 | 2568 | Chr2: 7342607-7347444 |
AT2G16940.1 | 2187 | Chr2: 7342607-7347464 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16940:three_prime_UTR:1 | 262 | Chr2: 7342607-7342868 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
RNA binding | ECO |
biological process | |
mRNA processing | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...