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Gene : AT2G16940 A. thaliana

DB identifier  ? AT2G16940 Secondary Identifier  ? locus:2039400
Brief Description  Splicing factor, CC1-like protein
TAIR Computational Description  Splicing factor, CC1-like protein;(source:Araport11)
TAIR Curator Summary  Splicing factor which interacts with IRR and SR45 to mediate pre-mRNA splicing to facilitate protein function, however not contributing to target specificity.
TAIR Short Description  Splicing factor, CC1-like
TAIR Aliases  CC1

0 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4858  
Location: Chr2:7342607-7347464 reverse strand

Gene models - AT2G16940 AT2G16940

? Gene models

Transcripts: 5  Exons: 73  Introns: 68 

Overlapping Features

? Genome features that overlap coordinates of this Gene

29 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

4 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
RNA binding  ? ECO  
biological process
mRNA processing  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets