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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 17, Exons: 15, Five Prime UTRs: 12, mRNAs: 7, Three Prime UTRs: 4, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16900:CDS:4 | 732 | Chr2: 7323857-7324588 | Arabidopsis thaliana |
AT2G16900:CDS:3 | 150 | Chr2: 7324737-7324886 | Arabidopsis thaliana |
AT2G16900:CDS:4.1 | 732 | Chr2: 7323857-7324588 | Arabidopsis thaliana |
AT2G16900:CDS:2 | 293 | Chr2: 7324737-7325029 | Arabidopsis thaliana |
AT2G16900:CDS:1 | 124 | Chr2: 7325251-7325374 | Arabidopsis thaliana |
AT2G16900:CDS:4.2 | 732 | Chr2: 7323857-7324588 | Arabidopsis thaliana |
AT2G16900:CDS:3.1 | 150 | Chr2: 7324737-7324886 | Arabidopsis thaliana |
AT2G16900:CDS:4.3 | 732 | Chr2: 7323857-7324588 | Arabidopsis thaliana |
AT2G16900:CDS:2.1 | 293 | Chr2: 7324737-7325029 | Arabidopsis thaliana |
AT2G16900:CDS:1.1 | 124 | Chr2: 7325251-7325374 | Arabidopsis thaliana |
AT2G16900:CDS:4.4 | 732 | Chr2: 7323857-7324588 | Arabidopsis thaliana |
AT2G16900:CDS:2.2 | 293 | Chr2: 7324737-7325029 | Arabidopsis thaliana |
AT2G16900:CDS:1.2 | 124 | Chr2: 7325251-7325374 | Arabidopsis thaliana |
AT2G16900:CDS:4.5 | 732 | Chr2: 7323857-7324588 | Arabidopsis thaliana |
AT2G16900:CDS:3.2 | 150 | Chr2: 7324737-7324886 | Arabidopsis thaliana |
AT2G16900:CDS:4.6 | 732 | Chr2: 7323857-7324588 | Arabidopsis thaliana |
AT2G16900:CDS:3.3 | 150 | Chr2: 7324737-7324886 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16900:exon:15 | 1019 | Chr2: 7323570-7324588 | Arabidopsis thaliana |
AT2G16900:exon:9 | 675 | Chr2: 7324737-7325411 | Arabidopsis thaliana |
AT2G16900:exon:2 | 336 | Chr2: 7325886-7326221 | Arabidopsis thaliana |
AT2G16900:exon:14 | 1003 | Chr2: 7323586-7324588 | Arabidopsis thaliana |
AT2G16900:exon:6 | 636 | Chr2: 7325251-7325886 | Arabidopsis thaliana |
AT2G16900:exon:1 | 432 | Chr2: 7325886-7326317 | Arabidopsis thaliana |
AT2G16900:exon:13 | 974 | Chr2: 7323615-7324588 | Arabidopsis thaliana |
AT2G16900:exon:7 | 161 | Chr2: 7325251-7325411 | Arabidopsis thaliana |
AT2G16900:exon:4 | 824 | Chr2: 7325494-7326317 | Arabidopsis thaliana |
AT2G16900:exon:10 | 423 | Chr2: 7324737-7325159 | Arabidopsis thaliana |
AT2G16900:exon:5 | 659 | Chr2: 7325251-7325909 | Arabidopsis thaliana |
AT2G16900:exon:12 | 882 | Chr2: 7323707-7324588 | Arabidopsis thaliana |
AT2G16900:exon:11 | 293 | Chr2: 7324737-7325029 | Arabidopsis thaliana |
AT2G16900:exon:8 | 54 | Chr2: 7325251-7325304 | Arabidopsis thaliana |
AT2G16900:exon:3 | 26 | Chr2: 7325886-7325911 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16900:five_prime_UTR:10 | 525 | Chr2: 7324887-7325411 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:2 | 336 | Chr2: 7325886-7326221 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:5 | 512 | Chr2: 7325375-7325886 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:8 | 161 | Chr2: 7325251-7325411 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:1 | 432 | Chr2: 7325886-7326317 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:6 | 37 | Chr2: 7325375-7325411 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:4 | 824 | Chr2: 7325494-7326317 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:11 | 273 | Chr2: 7324887-7325159 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:7 | 659 | Chr2: 7325251-7325909 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:12 | 143 | Chr2: 7324887-7325029 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:9 | 54 | Chr2: 7325251-7325304 | Arabidopsis thaliana |
AT2G16900:five_prime_UTR:3 | 26 | Chr2: 7325886-7325911 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G16900.4 | 2030 | Chr2: 7323570-7326221 |
AT2G16900.5 | 1932 | Chr2: 7323586-7325886 |
AT2G16900.7 | 1990 | Chr2: 7323615-7326317 |
AT2G16900.1 | 1860 | Chr2: 7323615-7326317 |
AT2G16900.6 | 2252 | Chr2: 7323615-7326317 |
AT2G16900.3 | 1964 | Chr2: 7323707-7325909 |
AT2G16900.2 | 1255 | Chr2: 7323707-7325911 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16900:three_prime_UTR:4 | 287 | Chr2: 7323570-7323856 | Arabidopsis thaliana |
AT2G16900:three_prime_UTR:3 | 271 | Chr2: 7323586-7323856 | Arabidopsis thaliana |
AT2G16900:three_prime_UTR:2 | 242 | Chr2: 7323615-7323856 | Arabidopsis thaliana |
AT2G16900:three_prime_UTR:1 | 150 | Chr2: 7323707-7323856 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE29890 | 1398 | Chr2: 7322419-7323816 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE29890:transposon_fragment:1 | 1398 | Chr2: 7322419-7323816 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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