External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16380:CDS:1 | 19 | Chr2: 7085972-7085990 | Arabidopsis thaliana |
AT2G16380:CDS:2 | 253 | Chr2: 7086083-7086335 | Arabidopsis thaliana |
AT2G16380:CDS:3 | 100 | Chr2: 7086691-7086790 | Arabidopsis thaliana |
AT2G16380:CDS:5 | 267 | Chr2: 7086897-7087163 | Arabidopsis thaliana |
AT2G16380:CDS:6 | 78 | Chr2: 7087255-7087332 | Arabidopsis thaliana |
AT2G16380:CDS:7 | 152 | Chr2: 7087411-7087562 | Arabidopsis thaliana |
AT2G16380:CDS:8 | 100 | Chr2: 7087656-7087755 | Arabidopsis thaliana |
AT2G16380:CDS:9 | 93 | Chr2: 7087842-7087934 | Arabidopsis thaliana |
AT2G16380:CDS:10 | 124 | Chr2: 7088012-7088135 | Arabidopsis thaliana |
AT2G16380:CDS:11 | 368 | Chr2: 7088230-7088597 | Arabidopsis thaliana |
AT2G16380:CDS:12 | 75 | Chr2: 7088680-7088754 | Arabidopsis thaliana |
AT2G16380:CDS:13 | 15 | Chr2: 7088844-7088858 | Arabidopsis thaliana |
AT2G16380:CDS:1.1 | 19 | Chr2: 7085972-7085990 | Arabidopsis thaliana |
AT2G16380:CDS:2.1 | 253 | Chr2: 7086083-7086335 | Arabidopsis thaliana |
AT2G16380:CDS:3.1 | 100 | Chr2: 7086691-7086790 | Arabidopsis thaliana |
AT2G16380:CDS:5.1 | 267 | Chr2: 7086897-7087163 | Arabidopsis thaliana |
AT2G16380:CDS:6.1 | 78 | Chr2: 7087255-7087332 | Arabidopsis thaliana |
AT2G16380:CDS:7.1 | 152 | Chr2: 7087411-7087562 | Arabidopsis thaliana |
AT2G16380:CDS:8.1 | 100 | Chr2: 7087656-7087755 | Arabidopsis thaliana |
AT2G16380:CDS:9.1 | 93 | Chr2: 7087842-7087934 | Arabidopsis thaliana |
AT2G16380:CDS:10.1 | 124 | Chr2: 7088012-7088135 | Arabidopsis thaliana |
AT2G16380:CDS:11.1 | 368 | Chr2: 7088230-7088597 | Arabidopsis thaliana |
AT2G16380:CDS:12.1 | 75 | Chr2: 7088680-7088754 | Arabidopsis thaliana |
AT2G16380:CDS:13.1 | 15 | Chr2: 7088844-7088858 | Arabidopsis thaliana |
AT2G16380:CDS:4 | 57 | Chr2: 7086734-7086790 | Arabidopsis thaliana |
AT2G16380:CDS:5.2 | 267 | Chr2: 7086897-7087163 | Arabidopsis thaliana |
AT2G16380:CDS:6.2 | 78 | Chr2: 7087255-7087332 | Arabidopsis thaliana |
AT2G16380:CDS:7.2 | 152 | Chr2: 7087411-7087562 | Arabidopsis thaliana |
AT2G16380:CDS:8.2 | 100 | Chr2: 7087656-7087755 | Arabidopsis thaliana |
AT2G16380:CDS:9.2 | 93 | Chr2: 7087842-7087934 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16380:exon:1 | 175 | Chr2: 7085698-7085872 | Arabidopsis thaliana |
AT2G16380:exon:3 | 42 | Chr2: 7085949-7085990 | Arabidopsis thaliana |
AT2G16380:exon:17 | 405 | Chr2: 7088844-7089248 | Arabidopsis thaliana |
AT2G16380:exon:2 | 65 | Chr2: 7085926-7085990 | Arabidopsis thaliana |
AT2G16380:exon:4 | 253 | Chr2: 7086083-7086335 | Arabidopsis thaliana |
AT2G16380:exon:6 | 100 | Chr2: 7086691-7086790 | Arabidopsis thaliana |
AT2G16380:exon:15 | 314 | Chr2: 7088844-7089157 | Arabidopsis thaliana |
AT2G16380:exon:5 | 258 | Chr2: 7086533-7086790 | Arabidopsis thaliana |
AT2G16380:exon:7 | 267 | Chr2: 7086897-7087163 | Arabidopsis thaliana |
AT2G16380:exon:8 | 78 | Chr2: 7087255-7087332 | Arabidopsis thaliana |
AT2G16380:exon:9 | 152 | Chr2: 7087411-7087562 | Arabidopsis thaliana |
AT2G16380:exon:10 | 100 | Chr2: 7087656-7087755 | Arabidopsis thaliana |
AT2G16380:exon:11 | 93 | Chr2: 7087842-7087934 | Arabidopsis thaliana |
AT2G16380:exon:12 | 124 | Chr2: 7088012-7088135 | Arabidopsis thaliana |
AT2G16380:exon:13 | 368 | Chr2: 7088230-7088597 | Arabidopsis thaliana |
AT2G16380:exon:14 | 75 | Chr2: 7088680-7088754 | Arabidopsis thaliana |
AT2G16380:exon:16 | 344 | Chr2: 7088844-7089187 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16380:five_prime_UTR:1 | 175 | Chr2: 7085698-7085872 | Arabidopsis thaliana |
AT2G16380:five_prime_UTR:3 | 23 | Chr2: 7085949-7085971 | Arabidopsis thaliana |
AT2G16380:five_prime_UTR:2 | 46 | Chr2: 7085926-7085971 | Arabidopsis thaliana |
AT2G16380:five_prime_UTR:4 | 201 | Chr2: 7086533-7086733 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G16380.1 | 2232 | Chr2: 7085698-7089248 |
AT2G16380.2 | 1989 | Chr2: 7085926-7089157 |
AT2G16380.3 | 1859 | Chr2: 7086533-7089187 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16380:three_prime_UTR:3 | 390 | Chr2: 7088859-7089248 | Arabidopsis thaliana |
AT2G16380:three_prime_UTR:1 | 299 | Chr2: 7088859-7089157 | Arabidopsis thaliana |
AT2G16380:three_prime_UTR:2 | 329 | Chr2: 7088859-7089187 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
SFH7_ARATH | function | Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity). |
SFH7_ARATH A0A1P8AX32_ARATH | similarity | Belongs to the SFH family. |
Function
Gene Ontology
cellular component | |
---|---|
plasma membrane | ECO |
Golgi membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
protein transport | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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