help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect

Gene : XYP2 A. thaliana

DB identifier  ? AT2G13820 Secondary Identifier  ? locus:2043750
Name  ? xylogen protein 2 Brief Description  Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
TAIR Computational Description  Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
TAIR Aliases  AtXYP2, LPTG11, XYP2

0 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2254  
Location: Chr2:5774089-5776342 reverse strand

Gene models - XYP2 AT2G13820

? Gene models

Transcripts: 3  Exons: 8  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

10 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
LTG11_ARATH LTG11_ARATH-2 developmental stage Preferentially expressed in vascular tissues such as the central cylinder, cotyledons of mature embryos and steles in seedlings roots (PubMed:21558309). Accumulates also in emerging root primordia (PubMed:21558309). In aerial parts, a weak expression is observed where new xylem tissues are formed, including the vasculature of young leaves, stem nodes and flower tori (PubMed:21558309).
LTG11_ARATH LTG11_ARATH-2 function Probable lipid transfer protein (By similarity). Proteoglycan-like factor that exhibits xylogen activity consisting in mediating local and inductive cell-cell interactions required for xylem differentiation (PubMed:15215864, PubMed:21558309).
A0A1P8AZB0_ARATH LTG11_ARATH LTG11_ARATH-2 similarity Belongs to the plant LTP family.
LTG11_ARATH LTG11_ARATH-2 tissue specificity Expressed in a vascular-specific manner, mainly in roots, and, to a lower extent, in hypocotyls, seedlings stems and flowers.

3 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
plasma membrane  ? ECO  
molecular function
lipid binding  ? ECO  
biological process
lipid transport  ? ECO  
xylem development  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets