External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 195, Exons: 48, Five Prime UTRs: 4, Genes: 2, Lnc RNA: 1, mRNAs: 6, miRNA: 1, miRNA Primary Transcript: 1, Three Prime UTRs: 6, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G07680:CDS:1 | 27 | Chr2: 3514774-3514800 | Arabidopsis thaliana |
AT2G07680:CDS:2 | 41 | Chr2: 3514871-3514911 | Arabidopsis thaliana |
AT2G07680:CDS:4 | 88 | Chr2: 3515010-3515097 | Arabidopsis thaliana |
AT2G07680:CDS:6 | 147 | Chr2: 3515178-3515324 | Arabidopsis thaliana |
AT2G07680:CDS:8 | 132 | Chr2: 3515412-3515543 | Arabidopsis thaliana |
AT2G07680:CDS:10 | 83 | Chr2: 3515622-3515704 | Arabidopsis thaliana |
AT2G07680:CDS:11 | 49 | Chr2: 3515784-3515832 | Arabidopsis thaliana |
AT2G07680:CDS:13 | 252 | Chr2: 3515908-3516159 | Arabidopsis thaliana |
AT2G07680:CDS:15 | 70 | Chr2: 3516230-3516299 | Arabidopsis thaliana |
AT2G07680:CDS:16 | 61 | Chr2: 3516374-3516434 | Arabidopsis thaliana |
AT2G07680:CDS:17 | 88 | Chr2: 3516547-3516634 | Arabidopsis thaliana |
AT2G07680:CDS:18 | 119 | Chr2: 3516925-3517043 | Arabidopsis thaliana |
AT2G07680:CDS:19 | 98 | Chr2: 3517141-3517238 | Arabidopsis thaliana |
AT2G07680:CDS:20 | 67 | Chr2: 3517487-3517553 | Arabidopsis thaliana |
AT2G07680:CDS:21 | 118 | Chr2: 3517641-3517758 | Arabidopsis thaliana |
AT2G07680:CDS:22 | 117 | Chr2: 3517840-3517956 | Arabidopsis thaliana |
AT2G07680:CDS:23 | 81 | Chr2: 3518038-3518118 | Arabidopsis thaliana |
AT2G07680:CDS:24 | 219 | Chr2: 3518200-3518418 | Arabidopsis thaliana |
AT2G07680:CDS:25 | 102 | Chr2: 3518511-3518612 | Arabidopsis thaliana |
AT2G07680:CDS:26 | 68 | Chr2: 3518689-3518756 | Arabidopsis thaliana |
AT2G07680:CDS:27 | 132 | Chr2: 3518842-3518973 | Arabidopsis thaliana |
AT2G07680:CDS:28 | 148 | Chr2: 3519060-3519207 | Arabidopsis thaliana |
AT2G07680:CDS:29 | 263 | Chr2: 3519292-3519554 | Arabidopsis thaliana |
AT2G07680:CDS:30 | 157 | Chr2: 3519633-3519789 | Arabidopsis thaliana |
AT2G07680:CDS:31 | 176 | Chr2: 3519875-3520050 | Arabidopsis thaliana |
AT2G07680:CDS:32 | 112 | Chr2: 3520129-3520240 | Arabidopsis thaliana |
AT2G07680:CDS:33 | 54 | Chr2: 3520329-3520382 | Arabidopsis thaliana |
AT2G07680:CDS:34 | 123 | Chr2: 3520482-3520604 | Arabidopsis thaliana |
AT2G07680:CDS:35 | 99 | Chr2: 3520689-3520787 | Arabidopsis thaliana |
AT2G07680:CDS:36 | 93 | Chr2: 3520931-3521023 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G07680:exon:41 | 521 | Chr2: 3521093-3521613 | Arabidopsis thaliana |
AT2G07680:exon:1 | 133 | Chr2: 3514668-3514800 | Arabidopsis thaliana |
AT2G07680:exon:47 | 603 | Chr2: 3522056-3522658 | Arabidopsis thaliana |
AT2G07680:exon:2 | 125 | Chr2: 3514676-3514800 | Arabidopsis thaliana |
AT2G07680:exon:3 | 56 | Chr2: 3514745-3514800 | Arabidopsis thaliana |
AT2G07680:exon:5 | 41 | Chr2: 3514871-3514911 | Arabidopsis thaliana |
AT2G07680:exon:7 | 88 | Chr2: 3515010-3515097 | Arabidopsis thaliana |
AT2G07680:exon:45 | 544 | Chr2: 3522056-3522599 | Arabidopsis thaliana |
AT2G07680:exon:4 | 27 | Chr2: 3514774-3514800 | Arabidopsis thaliana |
AT2G07680:exon:6 | 43 | Chr2: 3514871-3514913 | Arabidopsis thaliana |
AT2G07680:exon:8 | 86 | Chr2: 3515012-3515097 | Arabidopsis thaliana |
AT2G07680:exon:10 | 147 | Chr2: 3515178-3515324 | Arabidopsis thaliana |
AT2G07680:exon:12 | 92 | Chr2: 3515613-3515704 | Arabidopsis thaliana |
AT2G07680:exon:15 | 67 | Chr2: 3515784-3515850 | Arabidopsis thaliana |
AT2G07680:exon:17 | 56 | Chr2: 3516230-3516285 | Arabidopsis thaliana |
AT2G07680:exon:44 | 436 | Chr2: 3522056-3522491 | Arabidopsis thaliana |
AT2G07680:exon:9 | 186 | Chr2: 3515139-3515324 | Arabidopsis thaliana |
AT2G07680:exon:11 | 132 | Chr2: 3515412-3515543 | Arabidopsis thaliana |
AT2G07680:exon:13 | 83 | Chr2: 3515622-3515704 | Arabidopsis thaliana |
AT2G07680:exon:14 | 49 | Chr2: 3515784-3515832 | Arabidopsis thaliana |
AT2G07680:exon:16 | 252 | Chr2: 3515908-3516159 | Arabidopsis thaliana |
AT2G07680:exon:18 | 70 | Chr2: 3516230-3516299 | Arabidopsis thaliana |
AT2G07680:exon:19 | 61 | Chr2: 3516374-3516434 | Arabidopsis thaliana |
AT2G07680:exon:20 | 88 | Chr2: 3516547-3516634 | Arabidopsis thaliana |
AT2G07680:exon:21 | 119 | Chr2: 3516925-3517043 | Arabidopsis thaliana |
AT2G07680:exon:22 | 98 | Chr2: 3517141-3517238 | Arabidopsis thaliana |
AT2G07680:exon:23 | 67 | Chr2: 3517487-3517553 | Arabidopsis thaliana |
AT2G07680:exon:24 | 118 | Chr2: 3517641-3517758 | Arabidopsis thaliana |
AT2G07680:exon:25 | 117 | Chr2: 3517840-3517956 | Arabidopsis thaliana |
AT2G07680:exon:26 | 81 | Chr2: 3518038-3518118 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G07680:five_prime_UTR:1 | 106 | Chr2: 3514668-3514773 | Arabidopsis thaliana |
AT2G07680:five_prime_UTR:2 | 98 | Chr2: 3514676-3514773 | Arabidopsis thaliana |
AT2G07680:five_prime_UTR:3 | 29 | Chr2: 3514745-3514773 | Arabidopsis thaliana |
AT2G07680:five_prime_UTR:4 | 180 | Chr2: 3515139-3515318 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G05405 | AT2G05405 | 218 | Chr2: 3515087-3515304 | A. thaliana | None;(source:Araport11) | NULL | ||||
AT2G05415 | MIR5646 | 70 | Chr2: 3517383-3517452 | A. thaliana | microRNA ath-MIR5646 precursor;(source:Araport11) | NULL | ath-MIR5646 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G07680.2 | 4802 | Chr2: 3514668-3522658 |
AT2G07680.3 | 4554 | Chr2: 3514668-3522658 |
AT2G07680.4 | 4304 | Chr2: 3514676-3522491 |
AT2G07680.1 | 4352 | Chr2: 3514745-3522599 |
AT2G07680.5 | 4233 | Chr2: 3514774-3522491 |
AT2G07680.6 | 4311 | Chr2: 3515139-3522638 |
miRNA Primary Transcripts
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G05415.1 | 70 | Chr2: 3517383-3517452 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G07680:three_prime_UTR:1 | 341 | Chr2: 3521273-3521613 | Arabidopsis thaliana |
AT2G07680:three_prime_UTR:2 | 188 | Chr2: 3521787-3521974 | Arabidopsis thaliana |
AT2G07680:three_prime_UTR:3 | 603 | Chr2: 3522056-3522658 | Arabidopsis thaliana |
AT2G07680:three_prime_UTR:6 | 167 | Chr2: 3522492-3522658 | Arabidopsis thaliana |
AT2G07680:three_prime_UTR:4 | 108 | Chr2: 3522492-3522599 | Arabidopsis thaliana |
AT2G07680:three_prime_UTR:5 | 147 | Chr2: 3522492-3522638 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE15340 | 200 | Chr2: 3517283-3517482 | Arabidopsis thaliana |
AT2TE15350 | 174 | Chr2: 3521217-3521390 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE15340:transposon_fragment:1 | 200 | Chr2: 3517283-3517482 | Arabidopsis thaliana |
AT2TE15350:transposon_fragment:1 | 174 | Chr2: 3521217-3521390 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8AYI4_ARATH A0A1P8AYK9_ARATH A0A1P8AYJ8_ARATH A0A1P8AYL1_ARATH A0A1P8AYP5_ARATH | similarity | Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
ATP binding | ECO |
ATP hydrolysis activity | ECO |
ABC-type transporter activity | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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