External Links
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 42, Exons: 19, Five Prime UTRs: 5, mRNAs: 16, Three Prime UTRs: 14, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G04790:CDS:1 | 249 | Chr2: 1679471-1679719 | Arabidopsis thaliana |
AT2G04790:CDS:5 | 82 | Chr2: 1679805-1679886 | Arabidopsis thaliana |
AT2G04790:CDS:9 | 162 | Chr2: 1680015-1680176 | Arabidopsis thaliana |
AT2G04790:CDS:11 | 59 | Chr2: 1680269-1680327 | Arabidopsis thaliana |
AT2G04790:CDS:1.1 | 249 | Chr2: 1679471-1679719 | Arabidopsis thaliana |
AT2G04790:CDS:7 | 156 | Chr2: 1679805-1679960 | Arabidopsis thaliana |
AT2G04790:CDS:1.2 | 249 | Chr2: 1679471-1679719 | Arabidopsis thaliana |
AT2G04790:CDS:7.1 | 156 | Chr2: 1679805-1679960 | Arabidopsis thaliana |
AT2G04790:CDS:2 | 267 | Chr2: 1679471-1679737 | Arabidopsis thaliana |
AT2G04790:CDS:1.3 | 249 | Chr2: 1679471-1679719 | Arabidopsis thaliana |
AT2G04790:CDS:6 | 105 | Chr2: 1679805-1679909 | Arabidopsis thaliana |
AT2G04790:CDS:8 | 6 | Chr2: 1680015-1680020 | Arabidopsis thaliana |
AT2G04790:CDS:2.1 | 267 | Chr2: 1679471-1679737 | Arabidopsis thaliana |
AT2G04790:CDS:1.4 | 249 | Chr2: 1679471-1679719 | Arabidopsis thaliana |
AT2G04790:CDS:5.1 | 82 | Chr2: 1679805-1679886 | Arabidopsis thaliana |
AT2G04790:CDS:10 | 185 | Chr2: 1680015-1680199 | Arabidopsis thaliana |
AT2G04790:CDS:1.5 | 249 | Chr2: 1679471-1679719 | Arabidopsis thaliana |
AT2G04790:CDS:6.1 | 105 | Chr2: 1679805-1679909 | Arabidopsis thaliana |
AT2G04790:CDS:8.1 | 6 | Chr2: 1680015-1680020 | Arabidopsis thaliana |
AT2G04790:CDS:2.2 | 267 | Chr2: 1679471-1679737 | Arabidopsis thaliana |
AT2G04790:CDS:3 | 243 | Chr2: 1679477-1679719 | Arabidopsis thaliana |
AT2G04790:CDS:5.2 | 82 | Chr2: 1679805-1679886 | Arabidopsis thaliana |
AT2G04790:CDS:10.1 | 185 | Chr2: 1680015-1680199 | Arabidopsis thaliana |
AT2G04790:CDS:3.1 | 243 | Chr2: 1679477-1679719 | Arabidopsis thaliana |
AT2G04790:CDS:5.3 | 82 | Chr2: 1679805-1679886 | Arabidopsis thaliana |
AT2G04790:CDS:9.1 | 162 | Chr2: 1680015-1680176 | Arabidopsis thaliana |
AT2G04790:CDS:11.1 | 59 | Chr2: 1680269-1680327 | Arabidopsis thaliana |
AT2G04790:CDS:4 | 192 | Chr2: 1679528-1679719 | Arabidopsis thaliana |
AT2G04790:CDS:7.2 | 156 | Chr2: 1679805-1679960 | Arabidopsis thaliana |
AT2G04790:CDS:4.1 | 192 | Chr2: 1679528-1679719 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G04790:exon:12 | 739 | Chr2: 1679805-1680543 | Arabidopsis thaliana |
AT2G04790:exon:3 | 603 | Chr2: 1679307-1679909 | Arabidopsis thaliana |
AT2G04790:exon:1 | 413 | Chr2: 1679307-1679719 | Arabidopsis thaliana |
AT2G04790:exon:2 | 580 | Chr2: 1679307-1679886 | Arabidopsis thaliana |
AT2G04790:exon:4 | 277 | Chr2: 1679443-1679719 | Arabidopsis thaliana |
AT2G04790:exon:15 | 520 | Chr2: 1680015-1680534 | Arabidopsis thaliana |
AT2G04790:exon:5 | 734 | Chr2: 1679443-1680176 | Arabidopsis thaliana |
AT2G04790:exon:16 | 522 | Chr2: 1680015-1680536 | Arabidopsis thaliana |
AT2G04790:exon:6 | 245 | Chr2: 1679475-1679719 | Arabidopsis thaliana |
AT2G04790:exon:11 | 372 | Chr2: 1679805-1680176 | Arabidopsis thaliana |
AT2G04790:exon:17 | 529 | Chr2: 1680015-1680543 | Arabidopsis thaliana |
AT2G04790:exon:7 | 223 | Chr2: 1679497-1679719 | Arabidopsis thaliana |
AT2G04790:exon:10 | 105 | Chr2: 1679805-1679909 | Arabidopsis thaliana |
AT2G04790:exon:19 | 275 | Chr2: 1680269-1680543 | Arabidopsis thaliana |
AT2G04790:exon:14 | 446 | Chr2: 1680015-1680460 | Arabidopsis thaliana |
AT2G04790:exon:8 | 213 | Chr2: 1679507-1679719 | Arabidopsis thaliana |
AT2G04790:exon:9 | 82 | Chr2: 1679805-1679886 | Arabidopsis thaliana |
AT2G04790:exon:13 | 162 | Chr2: 1680015-1680176 | Arabidopsis thaliana |
AT2G04790:exon:18 | 269 | Chr2: 1680269-1680537 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G04790:five_prime_UTR:1 | 164 | Chr2: 1679307-1679470 | Arabidopsis thaliana |
AT2G04790:five_prime_UTR:2 | 28 | Chr2: 1679443-1679470 | Arabidopsis thaliana |
AT2G04790:five_prime_UTR:3 | 2 | Chr2: 1679475-1679476 | Arabidopsis thaliana |
AT2G04790:five_prime_UTR:4 | 31 | Chr2: 1679497-1679527 | Arabidopsis thaliana |
AT2G04790:five_prime_UTR:5 | 21 | Chr2: 1679507-1679527 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G04790.10 | 926 | Chr2: 1679307-1680537 |
AT2G04790.6 | 1060 | Chr2: 1679307-1680543 |
AT2G04790.5 | 1152 | Chr2: 1679307-1680543 |
AT2G04790.7 | 1040 | Chr2: 1679307-1680543 |
AT2G04790.9 | 955 | Chr2: 1679307-1680543 |
AT2G04790.8 | 1017 | Chr2: 1679307-1680543 |
AT2G04790.13 | 879 | Chr2: 1679443-1680534 |
AT2G04790.12 | 902 | Chr2: 1679443-1680534 |
AT2G04790.11 | 1009 | Chr2: 1679443-1680543 |
AT2G04790.14 | 849 | Chr2: 1679475-1680536 |
AT2G04790.15 | 758 | Chr2: 1679475-1680537 |
AT2G04790.16 | 870 | Chr2: 1679497-1680543 |
AT2G04790.4 | 857 | Chr2: 1679497-1680543 |
AT2G04790.3 | 765 | Chr2: 1679497-1680543 |
AT2G04790.1 | 741 | Chr2: 1679507-1680460 |
AT2G04790.2 | 726 | Chr2: 1679507-1680537 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G04790:three_prime_UTR:5 | 583 | Chr2: 1679961-1680543 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:2 | 172 | Chr2: 1679738-1679909 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:1 | 149 | Chr2: 1679738-1679886 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:6 | 162 | Chr2: 1680015-1680176 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:11 | 335 | Chr2: 1680200-1680534 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:8 | 514 | Chr2: 1680021-1680534 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:3 | 439 | Chr2: 1679738-1680176 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:12 | 337 | Chr2: 1680200-1680536 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:4 | 216 | Chr2: 1679961-1680176 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:9 | 523 | Chr2: 1680021-1680543 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:7 | 156 | Chr2: 1680021-1680176 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:13 | 275 | Chr2: 1680269-1680543 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:10 | 261 | Chr2: 1680200-1680460 | Arabidopsis thaliana |
AT2G04790:three_prime_UTR:14 | 210 | Chr2: 1680328-1680537 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE07780 | 533 | Chr2: 1680470-1681002 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE07780:transposon_fragment:1 | 533 | Chr2: 1680470-1681002 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...