External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNA: 1, CDSs: 37, Exons: 20, Five Prime UTRs: 3, Genes: 2, mRNAs: 4, Three Prime UTRs: 5
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G02720:CDS:4 | 240 | Chr2: 764595-764834 | Arabidopsis thaliana |
AT2G02730:CDS:12 | 45 | Chr2: 765280-765324 | Arabidopsis thaliana |
AT2G02730:CDS:11 | 72 | Chr2: 765445-765516 | Arabidopsis thaliana |
AT2G02730:CDS:10 | 81 | Chr2: 765649-765729 | Arabidopsis thaliana |
AT2G02730:CDS:9 | 33 | Chr2: 765860-765892 | Arabidopsis thaliana |
AT2G02730:CDS:8 | 75 | Chr2: 766121-766195 | Arabidopsis thaliana |
AT2G02730:CDS:7 | 90 | Chr2: 766281-766370 | Arabidopsis thaliana |
AT2G02730:CDS:6 | 102 | Chr2: 766473-766574 | Arabidopsis thaliana |
AT2G02730:CDS:5 | 71 | Chr2: 766664-766734 | Arabidopsis thaliana |
AT2G02730:CDS:4 | 76 | Chr2: 766818-766893 | Arabidopsis thaliana |
AT2G02730:CDS:3 | 69 | Chr2: 766972-767040 | Arabidopsis thaliana |
AT2G02730:CDS:2 | 62 | Chr2: 767131-767192 | Arabidopsis thaliana |
AT2G02730:CDS:1 | 55 | Chr2: 767282-767336 | Arabidopsis thaliana |
AT2G02730:CDS:12.1 | 45 | Chr2: 765280-765324 | Arabidopsis thaliana |
AT2G02730:CDS:11.1 | 72 | Chr2: 765445-765516 | Arabidopsis thaliana |
AT2G02730:CDS:10.1 | 81 | Chr2: 765649-765729 | Arabidopsis thaliana |
AT2G02730:CDS:9.1 | 33 | Chr2: 765860-765892 | Arabidopsis thaliana |
AT2G02730:CDS:8.1 | 75 | Chr2: 766121-766195 | Arabidopsis thaliana |
AT2G02730:CDS:7.1 | 90 | Chr2: 766281-766370 | Arabidopsis thaliana |
AT2G02730:CDS:6.1 | 102 | Chr2: 766473-766574 | Arabidopsis thaliana |
AT2G02730:CDS:5.1 | 71 | Chr2: 766664-766734 | Arabidopsis thaliana |
AT2G02730:CDS:4.1 | 76 | Chr2: 766818-766893 | Arabidopsis thaliana |
AT2G02730:CDS:3.1 | 69 | Chr2: 766972-767040 | Arabidopsis thaliana |
AT2G02730:CDS:2.1 | 62 | Chr2: 767131-767192 | Arabidopsis thaliana |
AT2G02730:CDS:1.1 | 55 | Chr2: 767282-767336 | Arabidopsis thaliana |
AT2G02730:CDS:12.2 | 45 | Chr2: 765280-765324 | Arabidopsis thaliana |
AT2G02730:CDS:11.2 | 72 | Chr2: 765445-765516 | Arabidopsis thaliana |
AT2G02730:CDS:10.2 | 81 | Chr2: 765649-765729 | Arabidopsis thaliana |
AT2G02730:CDS:9.2 | 33 | Chr2: 765860-765892 | Arabidopsis thaliana |
AT2G02730:CDS:8.2 | 75 | Chr2: 766121-766195 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G02720:exon:4 | 433 | Chr2: 764595-765027 | Arabidopsis thaliana |
AT2G04285:exon:1 | 24 | Chr2: 764617-764640 | Arabidopsis thaliana |
AT2G02730:exon:18 | 284 | Chr2: 764547-764830 | Arabidopsis thaliana |
AT2G02730:exon:16 | 56 | Chr2: 765109-765164 | Arabidopsis thaliana |
AT2G02730:exon:3 | 149 | Chr2: 767282-767430 | Arabidopsis thaliana |
AT2G02730:exon:17 | 565 | Chr2: 764604-765168 | Arabidopsis thaliana |
AT2G02730:exon:15 | 72 | Chr2: 765253-765324 | Arabidopsis thaliana |
AT2G02730:exon:1 | 219 | Chr2: 767282-767500 | Arabidopsis thaliana |
AT2G02730:exon:14 | 45 | Chr2: 765280-765324 | Arabidopsis thaliana |
AT2G02730:exon:13 | 72 | Chr2: 765445-765516 | Arabidopsis thaliana |
AT2G02730:exon:12 | 81 | Chr2: 765649-765729 | Arabidopsis thaliana |
AT2G02730:exon:11 | 33 | Chr2: 765860-765892 | Arabidopsis thaliana |
AT2G02730:exon:10 | 75 | Chr2: 766121-766195 | Arabidopsis thaliana |
AT2G02730:exon:9 | 90 | Chr2: 766281-766370 | Arabidopsis thaliana |
AT2G02730:exon:8 | 102 | Chr2: 766473-766574 | Arabidopsis thaliana |
AT2G02730:exon:7 | 71 | Chr2: 766664-766734 | Arabidopsis thaliana |
AT2G02730:exon:6 | 76 | Chr2: 766818-766893 | Arabidopsis thaliana |
AT2G02730:exon:5 | 69 | Chr2: 766972-767040 | Arabidopsis thaliana |
AT2G02730:exon:4 | 62 | Chr2: 767131-767192 | Arabidopsis thaliana |
AT2G02730:exon:2 | 202 | Chr2: 767282-767483 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G02730:five_prime_UTR:3 | 94 | Chr2: 767337-767430 | Arabidopsis thaliana |
AT2G02730:five_prime_UTR:1 | 164 | Chr2: 767337-767500 | Arabidopsis thaliana |
AT2G02730:five_prime_UTR:2 | 147 | Chr2: 767337-767483 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G02720 | locus:2058842 | AT2G02720 | 2101 | Chr2: 762927-765027 | A. thaliana | Pectate lyase family protein;(source:Araport11) | Pectate lyase | Pectate lyase family protein | ATPLL9 | |
AT2G04285 | AT2G04285 | 790 | Chr2: 763851-764640 | A. thaliana | Natural antisense transcript overlaps with AT2G02720;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G02720.1 | 1807 | Chr2: 762927-765027 |
AT2G02730.2 | 1292 | Chr2: 764547-767430 |
AT2G02730.1 | 1587 | Chr2: 764604-767500 |
AT2G02730.3 | 978 | Chr2: 765280-767483 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G02720:three_prime_UTR:1 | 193 | Chr2: 764835-765027 | Arabidopsis thaliana |
AT2G02730:three_prime_UTR:4 | 284 | Chr2: 764547-764830 | Arabidopsis thaliana |
AT2G02730:three_prime_UTR:2 | 56 | Chr2: 765109-765164 | Arabidopsis thaliana |
AT2G02730:three_prime_UTR:3 | 565 | Chr2: 764604-765168 | Arabidopsis thaliana |
AT2G02730:three_prime_UTR:1 | 27 | Chr2: 765253-765279 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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