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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 32, Exons: 17, Five Prime UTRs: 11, mRNAs: 6, Three Prime UTRs: 3, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G02170:CDS:7 | 207 | Chr2: 556595-556801 | Arabidopsis thaliana |
AT2G02170:CDS:6 | 82 | Chr2: 556898-556979 | Arabidopsis thaliana |
AT2G02170:CDS:5 | 454 | Chr2: 557062-557515 | Arabidopsis thaliana |
AT2G02170:CDS:3 | 543 | Chr2: 557598-558140 | Arabidopsis thaliana |
AT2G02170:CDS:2 | 145 | Chr2: 558254-558398 | Arabidopsis thaliana |
AT2G02170:CDS:1 | 30 | Chr2: 558581-558610 | Arabidopsis thaliana |
AT2G02170:CDS:7.1 | 207 | Chr2: 556595-556801 | Arabidopsis thaliana |
AT2G02170:CDS:6.1 | 82 | Chr2: 556898-556979 | Arabidopsis thaliana |
AT2G02170:CDS:5.1 | 454 | Chr2: 557062-557515 | Arabidopsis thaliana |
AT2G02170:CDS:3.1 | 543 | Chr2: 557598-558140 | Arabidopsis thaliana |
AT2G02170:CDS:2.1 | 145 | Chr2: 558254-558398 | Arabidopsis thaliana |
AT2G02170:CDS:1.1 | 30 | Chr2: 558581-558610 | Arabidopsis thaliana |
AT2G02170:CDS:7.2 | 207 | Chr2: 556595-556801 | Arabidopsis thaliana |
AT2G02170:CDS:6.2 | 82 | Chr2: 556898-556979 | Arabidopsis thaliana |
AT2G02170:CDS:5.2 | 454 | Chr2: 557062-557515 | Arabidopsis thaliana |
AT2G02170:CDS:4 | 343 | Chr2: 557598-557940 | Arabidopsis thaliana |
AT2G02170:CDS:7.3 | 207 | Chr2: 556595-556801 | Arabidopsis thaliana |
AT2G02170:CDS:6.3 | 82 | Chr2: 556898-556979 | Arabidopsis thaliana |
AT2G02170:CDS:5.3 | 454 | Chr2: 557062-557515 | Arabidopsis thaliana |
AT2G02170:CDS:3.2 | 543 | Chr2: 557598-558140 | Arabidopsis thaliana |
AT2G02170:CDS:2.2 | 145 | Chr2: 558254-558398 | Arabidopsis thaliana |
AT2G02170:CDS:1.2 | 30 | Chr2: 558581-558610 | Arabidopsis thaliana |
AT2G02170:CDS:7.4 | 207 | Chr2: 556595-556801 | Arabidopsis thaliana |
AT2G02170:CDS:6.4 | 82 | Chr2: 556898-556979 | Arabidopsis thaliana |
AT2G02170:CDS:5.4 | 454 | Chr2: 557062-557515 | Arabidopsis thaliana |
AT2G02170:CDS:4.1 | 343 | Chr2: 557598-557940 | Arabidopsis thaliana |
AT2G02170:CDS:7.5 | 207 | Chr2: 556595-556801 | Arabidopsis thaliana |
AT2G02170:CDS:6.5 | 82 | Chr2: 556898-556979 | Arabidopsis thaliana |
AT2G02170:CDS:5.5 | 454 | Chr2: 557062-557515 | Arabidopsis thaliana |
AT2G02170:CDS:3.3 | 543 | Chr2: 557598-558140 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G02170:exon:6 | 388 | Chr2: 558581-558968 | Arabidopsis thaliana |
AT2G02170:exon:17 | 369 | Chr2: 556433-556801 | Arabidopsis thaliana |
AT2G02170:exon:3 | 197 | Chr2: 558759-558955 | Arabidopsis thaliana |
AT2G02170:exon:2 | 16 | Chr2: 559020-559035 | Arabidopsis thaliana |
AT2G02170:exon:10 | 801 | Chr2: 557598-558398 | Arabidopsis thaliana |
AT2G02170:exon:5 | 133 | Chr2: 558759-558891 | Arabidopsis thaliana |
AT2G02170:exon:16 | 325 | Chr2: 556477-556801 | Arabidopsis thaliana |
AT2G02170:exon:8 | 79 | Chr2: 558581-558659 | Arabidopsis thaliana |
AT2G02170:exon:4 | 134 | Chr2: 558759-558892 | Arabidopsis thaliana |
AT2G02170:exon:11 | 612 | Chr2: 557598-558209 | Arabidopsis thaliana |
AT2G02170:exon:15 | 309 | Chr2: 556493-556801 | Arabidopsis thaliana |
AT2G02170:exon:14 | 82 | Chr2: 556898-556979 | Arabidopsis thaliana |
AT2G02170:exon:13 | 454 | Chr2: 557062-557515 | Arabidopsis thaliana |
AT2G02170:exon:12 | 543 | Chr2: 557598-558140 | Arabidopsis thaliana |
AT2G02170:exon:9 | 145 | Chr2: 558254-558398 | Arabidopsis thaliana |
AT2G02170:exon:7 | 375 | Chr2: 558581-558955 | Arabidopsis thaliana |
AT2G02170:exon:1 | 27 | Chr2: 559020-559046 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G02170:five_prime_UTR:6 | 358 | Chr2: 558611-558968 | Arabidopsis thaliana |
AT2G02170:five_prime_UTR:3 | 197 | Chr2: 558759-558955 | Arabidopsis thaliana |
AT2G02170:five_prime_UTR:2 | 16 | Chr2: 559020-559035 | Arabidopsis thaliana |
AT2G02170:five_prime_UTR:10 | 458 | Chr2: 557941-558398 | Arabidopsis thaliana |
AT2G02170:five_prime_UTR:9 | 79 | Chr2: 558581-558659 | Arabidopsis thaliana |
AT2G02170:five_prime_UTR:5 | 133 | Chr2: 558759-558891 | Arabidopsis thaliana |
AT2G02170:five_prime_UTR:8 | 49 | Chr2: 558611-558659 | Arabidopsis thaliana |
AT2G02170:five_prime_UTR:4 | 134 | Chr2: 558759-558892 | Arabidopsis thaliana |
AT2G02170:five_prime_UTR:11 | 269 | Chr2: 557941-558209 | Arabidopsis thaliana |
AT2G02170:five_prime_UTR:7 | 345 | Chr2: 558611-558955 | Arabidopsis thaliana |
AT2G02170:five_prime_UTR:1 | 27 | Chr2: 559020-559046 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G02170.2 | 1981 | Chr2: 556433-558968 |
AT2G02170.1 | 1885 | Chr2: 556433-559035 |
AT2G02170.3 | 1874 | Chr2: 556477-558891 |
AT2G02170.4 | 1762 | Chr2: 556477-558892 |
AT2G02170.6 | 1457 | Chr2: 556493-558209 |
AT2G02170.5 | 1935 | Chr2: 556493-559046 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G02170:three_prime_UTR:3 | 162 | Chr2: 556433-556594 | Arabidopsis thaliana |
AT2G02170:three_prime_UTR:2 | 118 | Chr2: 556477-556594 | Arabidopsis thaliana |
AT2G02170:three_prime_UTR:1 | 102 | Chr2: 556493-556594 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE02420 | 762 | Chr2: 558987-559748 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE02420:transposon_fragment:1 | 272 | Chr2: 558987-559258 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
Q9ZUM1_ARATH A0A1P8B0S4_ARATH | similarity | Belongs to the remorin family. |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...