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Gene : FDM5 A. thaliana

DB identifier  ? AT1G80790 Secondary Identifier  ? locus:2825160
Name  ? factor of DNA methylation 5 Brief Description  XH/XS domain-containing protein
TAIR Computational Description  XH/XS domain-containing protein;(source:Araport11)
TAIR Curator Summary  Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5). The mRNA is cell-to-cell mobile.
TAIR Short Description  XH/XS domain-containing protein
TAIR Aliases  FDM5

0 Gene Rifs

1 Organism

5 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3779  
Location: Chr1:30359649-30363427

Gene models - FDM5 AT1G80790

? Gene models

Transcripts: 3  Exons: 25  Introns: 22 

Overlapping Features

? Genome features that overlap coordinates of this Gene

15 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
FDM5_ARATH function Acts in association with FDM3 and FDM4 for RNA-directed DNA methylation (RdDM).

2 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
No terms in this category.
biological process
gene silencing by siRNA-directed DNA methylation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets