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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G80650:CDS:1 | 105 | Chr1: 30314609-30314713 | Arabidopsis thaliana |
AT1G80650:CDS:2 | 208 | Chr1: 30314898-30315105 | Arabidopsis thaliana |
AT1G80650:CDS:3 | 124 | Chr1: 30315234-30315357 | Arabidopsis thaliana |
AT1G80650:CDS:6 | 130 | Chr1: 30315471-30315600 | Arabidopsis thaliana |
AT1G80650:CDS:1.1 | 105 | Chr1: 30314609-30314713 | Arabidopsis thaliana |
AT1G80650:CDS:2.1 | 208 | Chr1: 30314898-30315105 | Arabidopsis thaliana |
AT1G80650:CDS:3.1 | 124 | Chr1: 30315234-30315357 | Arabidopsis thaliana |
AT1G80650:CDS:7 | 58 | Chr1: 30315482-30315539 | Arabidopsis thaliana |
AT1G80650:CDS:1.2 | 105 | Chr1: 30314609-30314713 | Arabidopsis thaliana |
AT1G80650:CDS:2.2 | 208 | Chr1: 30314898-30315105 | Arabidopsis thaliana |
AT1G80650:CDS:4 | 128 | Chr1: 30315234-30315361 | Arabidopsis thaliana |
AT1G80650:CDS:1.3 | 105 | Chr1: 30314609-30314713 | Arabidopsis thaliana |
AT1G80650:CDS:2.3 | 208 | Chr1: 30314898-30315105 | Arabidopsis thaliana |
AT1G80650:CDS:3.2 | 124 | Chr1: 30315234-30315357 | Arabidopsis thaliana |
AT1G80650:CDS:5 | 160 | Chr1: 30315441-30315600 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G80650:exon:1 | 221 | Chr1: 30314493-30314713 | Arabidopsis thaliana |
AT1G80650:exon:7 | 415 | Chr1: 30315471-30315885 | Arabidopsis thaliana |
AT1G80650:exon:8 | 521 | Chr1: 30315482-30316002 | Arabidopsis thaliana |
AT1G80650:exon:5 | 769 | Chr1: 30315234-30316002 | Arabidopsis thaliana |
AT1G80650:exon:2 | 192 | Chr1: 30314522-30314713 | Arabidopsis thaliana |
AT1G80650:exon:3 | 208 | Chr1: 30314898-30315105 | Arabidopsis thaliana |
AT1G80650:exon:4 | 124 | Chr1: 30315234-30315357 | Arabidopsis thaliana |
AT1G80650:exon:6 | 562 | Chr1: 30315441-30316002 | Arabidopsis thaliana |
AT1G80660:exon:18 | 360 | Chr1: 30315964-30316323 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G80650:five_prime_UTR:1 | 116 | Chr1: 30314493-30314608 | Arabidopsis thaliana |
AT1G80650:five_prime_UTR:2 | 87 | Chr1: 30314522-30314608 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G80660 | locus:2025727 | HA9 | H( )-ATPase 9 | 4234 | Chr1: 30315964-30320197 | A. thaliana | H[+]-ATPase 9;(source:Araport11) | NULL | H(+)-ATPase 9 | AHA9, HA9 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G80650.2 | 968 | Chr1: 30314493-30315885 |
AT1G80650.4 | 1045 | Chr1: 30314522-30316002 |
AT1G80650.3 | 1169 | Chr1: 30314522-30316002 |
AT1G80650.1 | 1086 | Chr1: 30314522-30316002 |
AT1G80660.1 | 3376 | Chr1: 30315964-30320196 |
AT1G80660.3 | 3387 | Chr1: 30315964-30320196 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G80650:three_prime_UTR:3 | 285 | Chr1: 30315601-30315885 | Arabidopsis thaliana |
AT1G80650:three_prime_UTR:2 | 463 | Chr1: 30315540-30316002 | Arabidopsis thaliana |
AT1G80650:three_prime_UTR:1 | 641 | Chr1: 30315362-30316002 | Arabidopsis thaliana |
AT1G80650:three_prime_UTR:4 | 402 | Chr1: 30315601-30316002 | Arabidopsis thaliana |
AT1G80660:three_prime_UTR:4 | 263 | Chr1: 30315964-30316226 | Arabidopsis thaliana |
AT1G80660:three_prime_UTR:3 | 355 | Chr1: 30315964-30316318 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
RNA binding | ECO |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...