help  | faq  | software  | BAR
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : TPR1 A. thaliana

DB identifier  ? AT1G80490 Secondary Identifier  ? locus:2198888
Name  ? TOPLESS-related 1 Brief Description  TOPLESS-related 1
TAIR Computational Description  TOPLESS-related 1;(source:Araport11)
TAIR Curator Summary  Encodes a protein with a Lissen-cephaly type-1-like homology (LisH) domain at the N terminus,a C-terminal to LisH (CTLH) domain, and 12 WD (tryptophan-aspartic acid)-40 repeats at the C terminus. It is closely related to Topless (TPL), which mediates auxin-dependent transcriptional repression during embryogenesis.
TAIR Short Description  TOPLESS-related 1
TAIR Aliases  TPR1

4 Gene Rifs

1 Organism

25 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 6308  
Location: Chr1:30260818-30267125 reverse strand

Gene models - TPR1 AT1G80490

? Gene models

Transcripts: 3  Exons: 72  Introns: 69 

Overlapping Features

? Genome features that overlap coordinates of this Gene

33 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TPR1_ARATH TPR1_ARATH-1 function Transcriptional corepressor. Activates TIR-NB-LRR R protein-mediated immune responses through repression of negative regulators such as CNGC2/DND1 (PubMed:20647385). Negative regulator of jasmonate responses (By similarity).
TPR1_ARATH TPR1_ARATH-1 tissue specificity Highly expressed in stamen primordium, microsporocyte, ovule primordium and megasporocyte during sporogenesis.

2 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
No terms in this category.
biological process
primary shoot apical meristem specification  ? ECO  
regulation of DNA-templated transcription  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets