External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G80245:CDS:3 | 290 | Chr1: 30174844-30175133 | Arabidopsis thaliana |
AT1G80245:CDS:5 | 10 | Chr1: 30175208-30175217 | Arabidopsis thaliana |
AT1G80245:CDS:3.1 | 290 | Chr1: 30174844-30175133 | Arabidopsis thaliana |
AT1G80245:CDS:5.1 | 10 | Chr1: 30175208-30175217 | Arabidopsis thaliana |
AT1G80245:CDS:1 | 81 | Chr1: 30174547-30174627 | Arabidopsis thaliana |
AT1G80245:CDS:2 | 103 | Chr1: 30174710-30174812 | Arabidopsis thaliana |
AT1G80245:CDS:4 | 190 | Chr1: 30174944-30175133 | Arabidopsis thaliana |
AT1G80245:CDS:5.2 | 10 | Chr1: 30175208-30175217 | Arabidopsis thaliana |
AT1G80245:CDS:3.2 | 290 | Chr1: 30174844-30175133 | Arabidopsis thaliana |
AT1G80245:CDS:5.3 | 10 | Chr1: 30175208-30175217 | Arabidopsis thaliana |
AT1G80245:CDS:1.1 | 81 | Chr1: 30174547-30174627 | Arabidopsis thaliana |
AT1G80245:CDS:2.1 | 103 | Chr1: 30174710-30174812 | Arabidopsis thaliana |
AT1G80245:CDS:4.1 | 190 | Chr1: 30174944-30175133 | Arabidopsis thaliana |
AT1G80245:CDS:5.4 | 10 | Chr1: 30175208-30175217 | Arabidopsis thaliana |
AT1G80245:CDS:1.2 | 81 | Chr1: 30174547-30174627 | Arabidopsis thaliana |
AT1G80245:CDS:2.2 | 103 | Chr1: 30174710-30174812 | Arabidopsis thaliana |
AT1G80245:CDS:4.2 | 190 | Chr1: 30174944-30175133 | Arabidopsis thaliana |
AT1G80245:CDS:5.5 | 10 | Chr1: 30175208-30175217 | Arabidopsis thaliana |
AT1G80245:CDS:1.3 | 81 | Chr1: 30174547-30174627 | Arabidopsis thaliana |
AT1G80245:CDS:2.3 | 103 | Chr1: 30174710-30174812 | Arabidopsis thaliana |
AT1G80245:CDS:4.3 | 190 | Chr1: 30174944-30175133 | Arabidopsis thaliana |
AT1G80245:CDS:5.6 | 10 | Chr1: 30175208-30175217 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G80245:exon:1 | 189 | Chr1: 30174101-30174289 | Arabidopsis thaliana |
AT1G80245:exon:2 | 249 | Chr1: 30174101-30174349 | Arabidopsis thaliana |
AT1G80245:exon:3 | 527 | Chr1: 30174101-30174627 | Arabidopsis thaliana |
AT1G80245:exon:10 | 424 | Chr1: 30174710-30175133 | Arabidopsis thaliana |
AT1G80245:exon:4 | 133 | Chr1: 30174157-30174289 | Arabidopsis thaliana |
AT1G80245:exon:7 | 89 | Chr1: 30174539-30174627 | Arabidopsis thaliana |
AT1G80245:exon:14 | 346 | Chr1: 30175208-30175553 | Arabidopsis thaliana |
AT1G80245:exon:5 | 467 | Chr1: 30174161-30174627 | Arabidopsis thaliana |
AT1G80245:exon:12 | 334 | Chr1: 30175208-30175541 | Arabidopsis thaliana |
AT1G80245:exon:6 | 172 | Chr1: 30174178-30174349 | Arabidopsis thaliana |
AT1G80245:exon:8 | 82 | Chr1: 30174546-30174627 | Arabidopsis thaliana |
AT1G80245:exon:9 | 103 | Chr1: 30174710-30174812 | Arabidopsis thaliana |
AT1G80245:exon:11 | 190 | Chr1: 30174944-30175133 | Arabidopsis thaliana |
AT1G80245:exon:13 | 335 | Chr1: 30175208-30175542 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G80245:five_prime_UTR:1 | 189 | Chr1: 30174101-30174289 | Arabidopsis thaliana |
AT1G80245:five_prime_UTR:8 | 89 | Chr1: 30174539-30174627 | Arabidopsis thaliana |
AT1G80245:five_prime_UTR:2 | 249 | Chr1: 30174101-30174349 | Arabidopsis thaliana |
AT1G80245:five_prime_UTR:3 | 527 | Chr1: 30174101-30174627 | Arabidopsis thaliana |
AT1G80245:five_prime_UTR:10 | 134 | Chr1: 30174710-30174843 | Arabidopsis thaliana |
AT1G80245:five_prime_UTR:4 | 133 | Chr1: 30174157-30174289 | Arabidopsis thaliana |
AT1G80245:five_prime_UTR:7 | 8 | Chr1: 30174539-30174546 | Arabidopsis thaliana |
AT1G80245:five_prime_UTR:5 | 386 | Chr1: 30174161-30174546 | Arabidopsis thaliana |
AT1G80245:five_prime_UTR:6 | 172 | Chr1: 30174178-30174349 | Arabidopsis thaliana |
AT1G80245:five_prime_UTR:9 | 1 | Chr1: 30174546-30174546 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G80245.6 | 1037 | Chr1: 30174101-30175542 |
AT1G80245.5 | 1097 | Chr1: 30174101-30175542 |
AT1G80245.3 | 966 | Chr1: 30174101-30175542 |
AT1G80245.4 | 1286 | Chr1: 30174101-30175542 |
AT1G80245.1 | 861 | Chr1: 30174157-30175553 |
AT1G80245.7 | 1094 | Chr1: 30174161-30175541 |
AT1G80245.2 | 882 | Chr1: 30174178-30175542 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G80245:three_prime_UTR:3 | 336 | Chr1: 30175218-30175553 | Arabidopsis thaliana |
AT1G80245:three_prime_UTR:1 | 324 | Chr1: 30175218-30175541 | Arabidopsis thaliana |
AT1G80245:three_prime_UTR:2 | 325 | Chr1: 30175218-30175542 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...