help  | faq  | software  | BAR
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide

Oops!

Error: Could not parse response to GET https://phytozome-next.jgi.doe.gov/phytomine/service/model: "" (0: SyntaxError: Unexpected end of JSON input)

Gene : PSF1 A. thaliana

DB identifier  ? AT1G80190 Secondary Identifier  ? locus:2016274
Name  ? partner of SLD five 1 Brief Description  partner of SLD five 1
TAIR Computational Description  partner of SLD five 1;(source:Araport11)
TAIR Curator Summary  Similar to the PSF1 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.
TAIR Short Description  partner of SLD five 1
TAIR Aliases  PSF1

0 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2907  
Location: Chr1:30158923-30161829

Gene models - PSF1 AT1G80190

? Gene models

Transcripts: 6  Exons: 38  Introns: 32 

Overlapping Features

? Genome features that overlap coordinates of this Gene

22 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A1P8AW53_ARATH A0A384KWN4_ARATH A0A1P8AW89_ARATH similarity Belongs to the GINS1/PSF1 family.

3 Proteins

Function

Gene Ontology

cellular component
GINS complex  ? ECO  
molecular function
No terms in this category.
biological process
DNA strand elongation involved in mitotic DNA replication  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets