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Gene : AT1G78400 A. thaliana

DB identifier  ? AT1G78400 Secondary Identifier  ? locus:2032125
Brief Description  Pectin lyase-like superfamily protein
TAIR Computational Description  Pectin lyase-like superfamily protein;(source:Araport11)
TAIR Curator Summary  PGX2 is a cell wall protein that codes for a polygalacturonase.
TAIR Short Description  Pectin lyase-like superfamily protein
TAIR Aliases  PGX2

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1489  
Location: Chr1:29498194-29499682 reverse strand

Gene models - AT1G78400 AT1G78400

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

CDSs: 3, Exons: 3, mRNA: 1, Three Prime UTR: 1

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A654EQA3_ARATH similarity Belongs to the glycosyl hydrolase 28 family.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
polygalacturonase activity  ? ECO  
biological process
carbohydrate metabolic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets